Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04- 26] 29 sequences; 43,283,415 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq6 95.1 1e-14 >seq6 Length=2952248 Score = 95.1 bits (104), Expect = 1e-14 Identities = 166/239 (69%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 104592 GTATTCGCCTACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCAT 104651 ||| || || || || || || || || || |||||||| | || || || || | ||| Sbjct 1057040 GTAGTCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGTTGAGCGAGATGTTCTCCAT 1057099 Query 104652 AAATTCGAAAGGATTCAAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCG 104711 || ||||| || || | || | || || | || |||||| | | || ||| || Sbjct 1057100 GAAGTCGAAGGGGTTGGTCGCGTTGTAGTACTTCTTGTTGCCAAGAGCCACCAGCAGGCG 1057159 Query 104712 ATCCGCCACAAATTCGATGTACTCGCACAT-AGAATGTGCATTCATGCCCAGCATTGCGA 104770 || || || || |||||||||| |||||| || || || ||||||||||||| |||| Sbjct 1057160 GTCGGCGACGAACTCGATGTACTGGCACATGAGGTTG-GCGTTCATGCCCAGCAGGGCGA 1057218 Query 104771 CGGGTAAAGCGTTAGTaaaaaaaTCTTTCTCGATGTCCACGGCTTCCTTAAACATGTTC 104829 |||| | || | || | || || |||||||| ||||| || || ||| || ||| Sbjct 1057219 CGGGCAGCGCATCCGTGAGGAACTCCTTCTCGATATCCACAGCCTCGGTAATAATCTTC 1057277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935848044495