Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04- 26] 29 sequences; 43,283,415 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq6 89.7 6e-13 >seq6 Length=2952248 Score = 89.7 bits (98), Expect = 6e-13 Identities = 245/371 (66%), Gaps = 11/371 (3%) Strand=Plus/Plus Query 93306 TACAAGGTAGTGTT-TCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATG 93364 ||||| ||| |||| ||||||||||| || ||||| | |||| | | || | ||| Sbjct 1057592 TACAACGTACTGTTGTCGATAGCGTTGAACAGGTAGTTGCGCTGCTTGGGCTCGCTGATG 1057651 Query 93365 TATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAAT 93424 || || ||||| | || || || | || || || | |||||||| || ||||| Sbjct 1057652 TACGTGTCGATCAGGAGCGAGTAGGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAG 1057711 Query 93425 CCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAG-AAAATCTCTCTACGAGATT 93483 |||||||| || | || || | ||||| || || ||| || | ||| || || || Sbjct 1057712 CCGTAGAAGCAGCGGGCCTCGGGAATCTGGACCTC-GGAGCTGAAGCGCTCGACCAGGTT 1057770 Query 93484 TTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTT 93543 || || || || ||||| || || || || ||||| | | ||| || || Sbjct 1057771 CTCGTTCACGATGCCATCCGACGCGGCGAAGAAAGCGAGGACGTGCGAGATGAAGAAGCG 1057830 Query 93544 CTCATCATCTTT---AAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTC 93600 |||||| || || | |||| | ||| ||| || || || || || || | || || Sbjct 1057831 CTCATCGTCGTTGAGACGCTTGTTCCAGTCGTGAAGGTCCTTGGAGAGGTCAATCTCCTC 1057890 Query 93601 GACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT-----GTCTTGATAT 93655 ||||||| || || || || || || |||||||| | ||| || || ||| || Sbjct 1057891 AGCAGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATTTGCCAGATCTGTGGTGTTGTTAG 1057950 Query 93656 TGAATTGGAAA 93666 || ||||||| Sbjct 1057951 TGGCTTGGAAA 1057961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860598137960