Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04-
26] 29 sequences; 43,283,415 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq6 89.7 6e-13
>seq6
Length=2952248
Score = 89.7 bits (98), Expect = 6e-13
Identities = 245/371 (66%), Gaps = 11/371 (3%)
Strand=Plus/Plus
Query 93306 TACAAGGTAGTGTT-TCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATG 93364
||||| ||| |||| ||||||||||| || ||||| | |||| | | || | |||
Sbjct 1057592 TACAACGTACTGTTGTCGATAGCGTTGAACAGGTAGTTGCGCTGCTTGGGCTCGCTGATG 1057651
Query 93365 TATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAAT 93424
|| || ||||| | || || || | || || || | |||||||| || |||||
Sbjct 1057652 TACGTGTCGATCAGGAGCGAGTAGGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAG 1057711
Query 93425 CCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAG-AAAATCTCTCTACGAGATT 93483
|||||||| || | || || | ||||| || || ||| || | ||| || || ||
Sbjct 1057712 CCGTAGAAGCAGCGGGCCTCGGGAATCTGGACCTC-GGAGCTGAAGCGCTCGACCAGGTT 1057770
Query 93484 TTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTT 93543
|| || || || ||||| || || || || ||||| | | ||| || ||
Sbjct 1057771 CTCGTTCACGATGCCATCCGACGCGGCGAAGAAAGCGAGGACGTGCGAGATGAAGAAGCG 1057830
Query 93544 CTCATCATCTTT---AAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTC 93600
|||||| || || | |||| | ||| ||| || || || || || || | || ||
Sbjct 1057831 CTCATCGTCGTTGAGACGCTTGTTCCAGTCGTGAAGGTCCTTGGAGAGGTCAATCTCCTC 1057890
Query 93601 GACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT-----GTCTTGATAT 93655
||||||| || || || || || || |||||||| | ||| || || ||| ||
Sbjct 1057891 AGCAGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATTTGCCAGATCTGTGGTGTTGTTAG 1057950
Query 93656 TGAATTGGAAA 93666
|| |||||||
Sbjct 1057951 TGGCTTGGAAA 1057961
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860598137960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |