Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04-
26] 29 sequences; 43,283,415 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq3 98.7 8e-16
>seq3
Length=5700105
Score = 98.7 bits (108), Expect = 8e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || || ||||||||||| || | ||| ||| ||| || || || ||||||
Sbjct 1597767 GTCGACTCCTTCTGAATGTTGTAGTCCGAGAGAGTGCGACCATCCTCCAGCTGCTTACCA 1597826
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| | ||||||||||| |||||||| || || || || ||||| ||||| ||
Sbjct 1597827 GCGAAAATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGCTCTTC 1597886
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||||| ||||| || || | || | || ||||| || || ||
Sbjct 1597887 ACGTTGTCGATGGTGTCGGAAGATTCCACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTC 1597946
Query 114366 TTTACAAAAATCTGCAT 114382
|| || |||||||||||
Sbjct 1597947 TTGACGAAAATCTGCAT 1597963
Score = 91.5 bits (100), Expect = 1e-13
Identities = 124/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || || || ||||||||||| || ||||| ||| || || || || |||
Sbjct 1598507 GTCGACTCCTTCTGGATGTTGTAATCCGACAAGGTACGGCCATCCTCGAGCTGCTTGCCA 1598566
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| |||| |||||||| || ||||||||||||||||| || || ||||| ||
Sbjct 1598567 GCGAAGATAAGACGCTGCTGATCCGGAGGAATGCCTTCCTTATCCTGGATCTTGCTCTTC 1598626
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGT 114358
| | || | |||||||| || ||||| || | ||| | || ||||||||
Sbjct 1598627 ACGTTGTCGATGGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 1598679
Score = 84.2 bits (92), Expect = 2e-11
Identities = 120/169 (71%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251
|| || || |||||||| ||| || ||||| || || || || || || ||| ||
Sbjct 1598229 TCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 1598288
Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311
|| || ||||| || |||||||||||||| || ||||| ||||| || | |
Sbjct 1598289 ATCAGGCGCTGCTGATCCGGAGGAATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTG 1598348
Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCA 114360
|| | |||||| | ||| ||||| |||| ||| | || ||||||||||
Sbjct 1598349 TCGATGGTGTCAGAGGACTCGACCTCCAGGGTGATGGTCTTGCCGGTCA 1598397
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420134251508748
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |