Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04-
26] 29 sequences; 43,283,415 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq6 378 1e-99
seq4 219 8e-52
seq10 170 4e-37
>seq6
Length=2952248
Score = 378 bits (418), Expect = 1e-99
Identities = 626/906 (69%), Gaps = 67/906 (7%)
Strand=Plus/Minus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || || |||||| || ||||||||||||||
Sbjct 1057935 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACTGCTGAGGAGATTGACCTC 1057876
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGA-ACGAAAAG---TTTTTCCTCAA 42415
|||||||| || |||| | | |||| | |||| || || ||| ||
Sbjct 1057875 TCCAAGGACCTTCACGACTGGAACAAGC-GTCTCAACGACGATGAGCGCTTCTTCATCTC 1057817
Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475
|| | || || ||||||||||| || || ||||| || || |||||||||| | |
Sbjct 1057816 GCACGTCCTCGCTTTCTTCGCCGCGTCGGATGGCATCGTGAACGAGAACCTGGTCGAGCG 1057757
Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
|||| ||||| ||| ||||| ||||||||||||||||||||||| ||
Sbjct 1057756 CTTCAGCTCCGAGGTCCAGATTCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 1057697
Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595
|||||| | ||||| ||| ||| | ||| || ||||||||||| || |||
Sbjct 1057696 GGAGAACATTCACTCCGAGACCTACTCGCTCCTGATCGACACGTACATCAGCGAGCCCAA 1057637
Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGA-----------------------GACGATG 42632
|||| ||| |||||||| || || || || ||||
Sbjct 1057636 GCAGCGCAACTACCTGTTCAACGCTATCGACAACAGTACGTTGTACCACATATGATGATG 1057577
Query 42633 C------------------------------CCTGCATCAAGAAGAAGGCGGACTGGGCG 42662
| ||||||||||||||||||| ||||||||
Sbjct 1057576 CAGAGCTTGGATCACTAACGCGTCACAGTTCCCTGCATCAAGAAGAAGGCCGACTGGGCT 1057517
Query 42663 CTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGC 42721
||| ||||||| | | | || | | || |||| | | ||| | ||||| ||||
Sbjct 1057516 CTCCGCTGGATCT-GCGACAAGAACTCTACCTTCGCTTCGCGTCTGATTGCCTTCGCCGC 1057458
Query 42722 CGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-GG 42780
||||||||| ||||||||| ||| | ||||| |||||||||||||||||| || ||
Sbjct 1057457 CGTCGAGGGTATCTTCTTCAGCGGCTCTTTCGCATCCATCTTCTGGCTCAAGAAGCGTGG 1057398
Query 42781 TGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATA 42840
| || |||||||| || |||||||||||||| |||||| | | |||||||| |||| |
Sbjct 1057397 TCTC-ATGCCCGGCCTTACCTTCTCGAACGAGCTCATCTCCCGTGACGAGGGAATGCACA 1057339
Query 42841 GGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGG 42900
|||||||||||||| ||||||||| ||| ||| | |||||| ||| |
Sbjct 1057338 CCGACTTTGCCTGCCTGCTGTTCTCG---CACATCAAGTCGAAGCCCAGCCCTGAGGCCG 1057282
Query 42901 TCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGC 42960
|| | || || || ||||| ||||| ||||||||||||||||||||| | ||||||
Sbjct 1057281 TCGAGAAGATTATTACCGAGGCTGTGGATATCGAGAAGGAGTTCCTCACGGATGCGCTGC 1057222
Query 42961 CCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCG 43020
|||| ||||| | ||||||||| | ||||||||||| |||||||| ||| ||||||||
Sbjct 1057221 CCGTCGCCCTGCTGGGCATGAACGCCAACCTCATGTGCCAGTACATCGAGTTCGTCGCCG 1057162
Query 43021 ACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGAC 43079
||| || || ||| | ||| || | ||||||| || | ||||||||||
Sbjct 1057161 ACCGCCTGCTGGTGGCTCTTGGCAACAAGAAG-TACTACAACGCGACCAACCCCTTCGAC 1057103
Query 43080 TTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGAC 43139
|| ||||||||||||||| | | |||||||||||||| |||||||||||||| | |||
Sbjct 1057102 TTCATGGAGAACATCTCGCTCAACGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGTGAC 1057043
Query 43140 TACCAG 43145
||||||
Sbjct 1057042 TACCAG 1057037
>seq4
Length=4775223
Score = 219 bits (242), Expect = 8e-52
Identities = 495/737 (67%), Gaps = 14/737 (2%)
Strand=Plus/Minus
Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747
|||| |||||||||||| || || || | | ||||||| ||| |||||| ||| |||
Sbjct 4664341 GCCAAGTTGCAGACGGCGACTTCATCGGGGGCAGTGTACTCGACGATCTCGCAGCAAAGG 4664282
Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTG 244807
||| || |||||||| || | || || ||| |||| ||||||| |||||||
Sbjct 4664281 TTAGAGCTGCGAATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTG 4664222
Query 244808 TAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCC 244867
|| | ||||||||| || ||||||| || || |||| | || ||| || | |
Sbjct 4664221 TACAACATGAAGGGGTTGCCAGTCTCGACTTGAGCCTCGAGAATAGCGTACCACAGCTTC 4664162
Query 244868 CTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCG 244927
||| ||| ||| ||| | |||||| |||||| | ||| || ||||||
Sbjct 4664161 TGCGCCCGGACAGTCTCGCGGCCACGGCCCTCCTTCTCGTACTGCTCGTAGAGAGCCTCG 4664102
Query 244928 AACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAGACTCC 244985
||||| ||| | || || | || || ||||| || | ||||||||||| |||
Sbjct 4664101 AACTCCTCGCCATACACGTCTGCCAGACCCGGGCATTCGTTG--GGGCACATGAGGGTCC 4664044
Query 244986 ACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGA 245045
| |||| | || ||| | || |||||| |||||||| |||||||| || | ||| |
Sbjct 4664043 AAGTGCCGTTCTGCTCGACACGCTTCATGAACAGGTCGGGAATCCAGAGAGCGTAGAACA 4663984
Query 245046 GGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGA 245105
|||| | | | || ||| || |||||| | || || | || || |
Sbjct 4663983 GGTCACGCGCGCGGACTTCCTCCTTTCCGTGGTTCTTGCGAAGGTCGAGGAAACTGAACA 4663924
Query 245106 CGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCT 245165
| ||| ||||||| ||||| | ||||| || | |||||| || |||||||| || ||||
Sbjct 4663923 CATCGGCGTGCCACGGCTCAAGGTAGATGGCAAAGGCGCCCGGGCGCTTGTTACCGCCCT 4663864
Query 245166 GGTCCAC-CATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAG 245224
|||| || | | | | | |||| ||| ||| || | || | | || || |
Sbjct 4663863 GGTCAACGTAGCGTGCAGTG-TTGTTGTAGACGCGGAGCATGGGAATCAGACCATTGCTG 4663805
Query 245225 TGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGAC----AT 245280
||||||||| || |||||| ||| || | | || ||| | ||||| |
Sbjct 4663804 GTGCCGTTGGTACCGGCAATGTAGCTGCCGGTGGCAC---GGATGC-GGTGGACGTTGAG 4663749
Query 245281 GCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCC 245340
|| | || || ||| ||| ||||| | ||||||| |||||| ||||| |||||
Sbjct 4663748 ACCGATGCCTCCAGCGGTCTTAGAGATCATGGCGCAGGTCTTGAGCGTGTCGTAGATGCC 4663689
Query 245341 CTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCT 245400
||| ||||||||| |||||||| || || ||||| || | |||||| |||||||| |
Sbjct 4663688 CTCGATGCTGTCCTCCTTCATGTCGATGAGGAAGCAAGATGCCAGCTGCGGCTTGGGAGT 4663629
Query 245401 GCACGAGTTGAACAGAG 245417
| | |||||||||||
Sbjct 4663628 TCCGGCGTTGAACAGAG 4663612
>seq10
Length=1499934
Score = 170 bits (188), Expect = 4e-37
Identities = 265/377 (70%), Gaps = 4/377 (1%)
Strand=Plus/Minus
Query 244765 GCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCC 244824
||| |||||||| || ||| ||| |||||||||||||||||| |||| | |||||
Sbjct 1070881 GCCGAGGTGCTGCTGGTTGCTCTTTCTGTTGCAGGCGTCCTTGTACAGCACGCTCGGCCC 1070822
Query 244825 CCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCT 244884
|| || || |||||||| ||| || | |||| || |||| ||||||||||| |
Sbjct 1070821 GCCCGTGTCCAGCTGGGCCTCGACGATGGCCGTCCACAGCTCCCGCGCCTTGACCGTGCG 1070762
Query 244885 GCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGAC 244944
||| | ||||| |||||| || ||| || || ||||||||| ||||| |
Sbjct 1070761 GCGGCCGCATCCCTCGCTCTCGTACCGCTCGTAGAGCGCGCCGAACTCGG--CCCCATAG 1070704
Query 244945 C--TCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTG 245002
| ||| | || ||||||||| ||||||||||| || |||| |||| | | | |
Sbjct 1070703 CAATCGACGAGCCCGGGGCACTCGGCCGGGCACATCAGCGTCCAGTCGCGATCCGCGTCG 1070644
Query 245003 ACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGC 245062
|| | | ||||||| ||||| || | ||| || || | | || |||| | || | ||
Sbjct 1070643 ACGCGCCGCATGAACAGGTCCGGTACCCACAGCGCGTAGCGCAGATCCCGCGCCCGCAGC 1070584
Query 245063 TCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGC 245122
|| ||| ||| | | | ||| | | ||||| ||||||||| ||||||| |||
Sbjct 1070583 TCCTCCTTGCCGAAGCTGCGGCCCAGGTTGAGGAAGTCGAAGACGTCGGCGTGCCACGGC 1070524
Query 245123 TCCATGTAGACAGCGAG 245139
|||| ||||||||||||
Sbjct 1070523 TCCAGGTAGACAGCGAG 1070507
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944338857677040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |