Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04-
26] 29 sequences; 43,283,415 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq4 129 7e-25
seq6 107 2e-18
>seq4
Length=4775223
Score = 129 bits (142), Expect = 7e-25
Identities = 658/1035 (64%), Gaps = 32/1035 (3%)
Strand=Plus/Minus
Query 113903 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGG 113961
|||||||| || ||||| || ||| ||| | ||| ||||| || | ||||| ||
Sbjct 4664917 TTGACAACCTGGAATTCACCGGCCAGGACGCGGCG-AGAGTAGATGTTCGATGTGTAAGG 4664859
Query 113962 CTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCAT 114021
||| |||||||| ||| ||| | || || || ||||| || ||||||||||| |
Sbjct 4664858 CTCGAAGCACTCGTTGAAACCAAGAATCTGACTCGTCGAGGCAGTAGGCATGGGTGCGAC 4664799
Query 114022 GAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA 114081
||| || ||| |||| ||| | | ||| |||| ||| |||||||| |
Sbjct 4664798 GAGCAGAGAGTTGCGGATACCGTGCTGAGCAATCTCGGCCTTCAGGCTATCCCAGTCCCA 4664739
Query 114082 GTTGAGCTTTG----TCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTG 114137
| || | || ||| | |||||| || ||||||||||||| || ||||| |
Sbjct 4664738 GA-GATCGGTGGGAGTCTTG---TTCCACATGTCGTACTGGAGGATACCCTGAGAGGCAG 4664683
Query 114138 GCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCCT 114194
| |||| || ||||| || || || | | || || | ||| ||| ||
Sbjct 4664682 GGCTACCCTGGAACGTCTCATAAGGACCGTGGAGCTTGGCAAGCTCGATCGAG---GCAG 4664626
Query 114195 CGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGG 114254
|||||| || || || || ||||| || || | || | |||||||||| ||
Sbjct 4664625 TGAGGGCAGCATGGTAAATGGTCTCGAAGATCTGGATGTTGAGCTGCTTGGCCTCGGGGG 4664566
Query 114255 AATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAA 114314
| || || | | ||| | || |||| || ||||| | |||||| | |||
Sbjct 4664565 AGTCGAAAGGCATGCGGAGAGCCAGGAAGGCATCAGCAAGACCATTGACACCCACCGCAA 4664506
Query 114315 TTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCTAT 114371
| ||||| || | ||| || ||||| ||| ||| ||| || || || | |
Sbjct 4664505 TGGGGCGGTGACGCATGTTGCTCTTTCTAGC---CTCAGGCACCGGGTAGTGGTTGATGT 4664449
Query 114372 CGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAAT 114431
|||| | | | || | || || | |||| |||| || || ||||| | | | |
Sbjct 4664448 CGATGATCTTGTTCAAGTTCTTCACAAGCACCTGAGTGACCTCGTGGAGCTTGTTGAAGT 4664389
Query 114432 CAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACA 114491
| || | | |||| | | || | | ||||| || | || |||| || || |
Sbjct 4664388 CGTAAATACCGTTCTCGACGTCCACGAAGGTCGGAAGAGCCAGGGAAGCCAAGTTGCAGA 4664329
Query 114492 CAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAA 114551
| | | ||||| |||||||||| | || || || | || || || ||
Sbjct 4664328 CGGCGACTTCATCGGGGGCAGTGTACTCGACGATCTCGCAGCAAAGGTTAGAGCTGCGAA 4664269
Query 114552 TGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATG 114611
||||||| | ||||| || || ||| ||| || |||||||| | |||| | |
Sbjct 4664268 TGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAACATGAAGG 4664209
Query 114612 GCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACA 114670
| | || ||||| ||| | || ||||||||| | ||| | | || ||| | || |||
Sbjct 4664208 GGTTGCCAGTCTCGACTTGAGCCTCGAGAATAGCGTACCACAGCTTCTGCGCCCGG-ACA 4664150
Query 114671 GTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACC- 114729
|| || | | || ||||||| |||||||| |||||| || || ||||| || ||
Sbjct 4664149 GTCTCGCGGCCACGGCCCTCCTTCTCGTACTGCTCGTAGAGAGCCTCGAACTCCTCGCCA 4664090
Query 114730 --CACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG-CAGAAGAGAGACCATTGACCACC 114786
|||| |||| || || || || || |||| || | ||| | ||| ||
Sbjct 4664089 TACACG---TCTGCCAGACCCGG-GCATTCGTTGGGGCACATGAGGGTCCAAGTGCCGTT 4664034
Query 114787 CTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACA 114846
|| ||| |||||||||||||| ||||| || ||||||||||| |||| || || ||
Sbjct 4664033 CTGCTCGACACGCTTCATGAACAGGTCGGGAATCCAGAGAGCGTAGAACAGGTCACGCGC 4663974
Query 114847 GCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTG 114906
||| |||| || | || || || || | || | || | | ||| |||||
Sbjct 4663973 GCGGACTTCCTCCTTTCCGTGGTTCTTGCGAAGGTCGAGGAAACTGAACACATCGGCGTG 4663914
Query 114907 CCACGGTTCCAGGTA 114921
|||||| || |||||
Sbjct 4663913 CCACGGCTCAAGGTA 4663899
>seq6
Length=2952248
Score = 107 bits (118), Expect = 2e-18
Identities = 305/463 (66%), Gaps = 28/463 (6%)
Strand=Plus/Plus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
|||||| ||||| ||||||||||||||||| ||||| |||| | ||| ||||||||
Sbjct 1057040 GTAGTCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGTTGAGCGAGATGTTCTCCAT 1057099
Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCCCAATCTGTTTGAGGAGA 125875
|| || || ||||| | | ||| | | || ||| || | | || ||
Sbjct 1057100 GAAGTCGAAGGGGTTGGTCGCGTTGTAGTACTTCTTGTTGCCAAGAGCCACC--AGCAGG 1057157
Query 125876 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 125935
|| || | |||| |||| ||||||| |||| | | |||||| || | |||
Sbjct 1057158 CGGTCGGCGACGAACTCGATGTACTGGCACATGAGGTTGGCGTTCATGCCCAGCAGGGCG 1057217
Query 125936 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCG 125995
|| ||||| ||| || |||| ||||||| || ||||| || || | | ||
Sbjct 1057218 ACGGGCAGCGCATCCGTGAGGAACTCCTTCTCGATATCCACAGCCTCG-GTA--AT---- 1057270
Query 125996 TGAATGGTGTCCAC---CCCAGGTCTATTGCGCAAAGTCTTGAAG----AGTTCCAC--- 126045
||| | || || | |||| || | || | ||||| | || | |
Sbjct 1057271 --AATCTTCTCGACGGCCTCAGGGCT---GGGCTTCGACTTGATGTGCGAGAACAGCAGG 1057325
Query 126046 --GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGT 126103
|||||| || ||| | |||||||||||||||||||| || ||||||||| ||
Sbjct 1057326 CAGGCAAAGTCGGTGTGCATTCCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTAAGG 1057385
Query 126104 CCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAG 126163
|| ||||||||||| |||||||| | |||||| || | || || || |||||||
Sbjct 1057386 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGATGCGAAAGAGCCGCTGAAGAAG 1057445
Query 126164 ATTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 126206
|| ||||| || ||||| |||| |||||| ||| ||||
Sbjct 1057446 ATACCCTCGACGGCGGCGAAGGCAATCAGACGCGAAGCGAAGG 1057488
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597353383459320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |