Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04-
26] 29 sequences; 43,283,415 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq4 235 5e-57
>seq4
Length=4775223
Score = 235 bits (260), Expect = 5e-57
Identities = 495/731 (68%), Gaps = 8/731 (1%)
Strand=Plus/Plus
Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GACGAACAA 93962
||||||||||| || || || ||| ||| || | || || ||||| || ||| | ||
Sbjct 4663614 CTGTTCAACGCCGGAACTCCCAAGCCGCAGCTGGCATCTTGCTTCCTCATCGAC-ATGAA 4663672
Query 93963 GGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATA 94022
|| ||| |||| || || | ||||| |||||| ||| || | ||||| ||
Sbjct 4663673 GGAGGACAGCATCGAGGGCATCTACGACACGCTCAAGACCTGCGCCATGATCTCTAAGAC 4663732
Query 94023 CGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGG 94082
||| || || ||||| ||| |||||| | | ||||||| || |||||| |||
Sbjct 4663733 CGCTGGAGGCATCGGTCTCAACGTCCACCGCATCCGTGCCACCGGCAGCTACATTGCCGG 4663792
Query 94083 TACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCG 94142
|||||| |||||| ||| || || | || |||||||| |||| ||||||| | || ||
Sbjct 4663793 TACCAACGGCACCAGCAATGGTCTGATTCCCATGCTCCGCGTCTACAACAACACTGCACG 4663852
Query 94143 CTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTG 94202
|||||| |||||||| ||| | | | ||| | || || |||| || ||||| ||
Sbjct 4663853 CTACGTTGACCAGGGCGGTAACAAGCGCCCGGGCGCCTTTGCCATCTACCTTGAGCCGTG 4663912
Query 94203 GCACGCGGACGTG--CAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAG 94260
|||||| || ||| ||| |||| ||||||| || ||||||||||| || || |
Sbjct 4663913 GCACGCCGATGTGTTCAG--TTTCCTCGACCTTCGCAAGAACCACGGAAAGGAGGAAGTC 4663970
Query 94261 AGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAG 94320
| || | ||||| ||||||||||||||| | || ||||| || ||||| || ||||||
Sbjct 4663971 CGCGCGCGTGACCTGTTCTACGCTCTCTGGATTCCCGACCTGTTCATGAAGCGTGTCGAG 4664030
Query 94321 AAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGT 94380
| ||| | | |||| || | || ||||| ||||| || || ||| | ||||| | |
Sbjct 4664031 CAGAACGGCACTTGGACCCTCATGTGCCCCAACGAATGCCCGGGTCTGGCAGACGTGTAT 4664090
Query 94381 GGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGGTT 94440
|| | || || | | || | | ||||| | ||||| | | | || |
Sbjct 4664091 GGCGAGGAGTTCGAGGCTCTCTACGAGCAGTACGAGAAGGAGGGCCGTGGCCGCGAGACT 4664150
Query 94441 ATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCC 94500
| || |||||||||| | || | || | || || ||||| || | |||
Sbjct 4664151 GTCCGGGCGCAGAAGCTGTGGTACGCTATTCTCGAGGCTCAAGTCGAGACTGGCAACCCC 4664210
Query 94501 TACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGAT 94559
| ||| |||| |||||| | ||| |||| |||| ||||||| || | || || ||
Sbjct 4664211 TTCATGTTGTACAAGGACCACTG-CAACCGCAAGAGCAACCAGAAGAATCTTGGCACCAT 4664269
Query 94560 CAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGT 94619
||||| || || ||| |||||| |||||||| ||| | || || || | || ||
Sbjct 4664270 TCGCAGCTCTAACCTTTGCTGCGAGATCGTCGAGTACACTGCCCCCGATGAAGTCGCCGT 4664329
Query 94620 GTGTAACCTGG 94630
|| ||| |||
Sbjct 4664330 CTGCAACTTGG 4664340
Score = 107 bits (118), Expect = 2e-18
Identities = 222/325 (68%), Gaps = 4/325 (1%)
Strand=Plus/Plus
Query 95089 AACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAAC 95148
||| | ||||| || || |||||||| || ||||| ||| ||||| ||||| ||||
Sbjct 4664787 AACTCTCTGCTCGTCGCACCCATGCCTACTGCCTCGACGAGTCAGATTCTTGGTTTCAAC 4664846
Query 95149 GAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTC 95208
|||| ||||| || | ||| || ||| | ||| | || || || ||||| ||||||
Sbjct 4664847 GAGTGCTTCGAGCCTTACACATCGAACATCTACTCTCGCCGCGTCCTGGCCGGTGAATTC 4664906
Query 95209 CCCGTCATCAACAAGCACCTCCTACGGGACCTGA-CGTCTCTGGGTGTGTGGGGTGACAA 95267
| || ||||| ||||| |||| || || | || || | ||| |||| |
Sbjct 4664907 CAGGTTGTCAACCCCTGGCTCCTGAAGGACTTGGTCGAC-CTCGGGCTATGGTCTGACCA 4664965
Query 95268 GGTCAAGAACCAACTGCTACGCGCCAA-CGGCTCCGTCCAGAACATCCCGCAAATACCGG 95326
| | ||||||| | | ||| | | ||| ||| | ||| |||| || | || || |
Sbjct 4664966 GATGAAGAACCGCATCAT-CGCTTCTAGCGGTTCCATTCAGCACATTCCCAACATTCCCG 4665024
Query 95327 AGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTCGACC 95386
| ||||||||||||||||||||||| || ||||| | | |||||| || || |
Sbjct 4665025 ACGACATCAAGGCGCTCTACAAGACTGTCTGGGAACTTTCTCAGCGCACCATCGTCCAGA 4665084
Query 95387 ACGCGGCCGCCCGCGGGCCCTTCAT 95411
|| |||| ||| || |||||||
Sbjct 4665085 TGGCTGCCGACCGTGGTGCCTTCAT 4665109
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494723020662840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |