Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04- 26] 29 sequences; 43,283,415 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 6e-13 >seq1 Length=6723813 Score = 89.7 bits (98), Expect = 6e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 159573 TGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAGAATGGTGGTCA 159632 |||||| || || | || |||| | | || |||||||| |||||| | || ||||| Sbjct 1452798 TGGTGTTTTCGAGCCTAAGATCAAGGAAGTCTGCAAGATTGTCCATGAGCACGGCGGTCA 1452857 Query 159633 GGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTA 159692 || || | ||||| || || | ||||| ||| | || || || | || Sbjct 1452858 AGTGTACATGGATGGCGCCAACATGAATGCTCAGATCGGGCTGTGCTCTCCCGGCGAGAT 1452917 Query 159693 TGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGG 159752 || || || || || || || ||| | || ||||| ||||||||||| || || ||||| Sbjct 1452918 CGGCGCCGACGTCTGCCACCTGAACCTTCACAAGACCTTCTGTATTCCTCACGGTGGTGG 1452977 Query 159753 AGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACATCT 159791 ||||||||| || || || || ||||| || || || || Sbjct 1452978 AGGTCCTGGAGTCGGCCCCATCGGTGTCGCCAAGCACCT 1453016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050986831440