Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04-
26] 29 sequences; 43,283,415 total letters
Query= NC_018874.1
Length=211518
Score E
Sequences producing significant alignments: (Bits) Value
seq8 125 1e-23
>seq8
Length=2003875
Score = 125 bits (138), Expect = 1e-23
Identities = 421/643 (65%), Gaps = 13/643 (2%)
Strand=Plus/Minus
Query 197038 AAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTT-GTCGGGATTGTAACAGGC 197096
|| || ||||| || || || | || ||||||| | | ||| | || | ||||| || ||
Sbjct 1257995 AATCCAGTACCTATGTTGCAGACGGTTTCGTACGTATCGTTAGACGAG-TTGTAGCACGC 1257937
Query 197097 GAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAGCCTCCGATAAC 197156
|| | ||| ||||||||| || | ||| ||| |||| | | |||| | ||
Sbjct 1257936 AAGCAGGAAGGCGCCGTAGACAGAAGTGCGCTTGCCCTTGCCGTAGTAAGCTCCAAGCAC 1257877
Query 197157 CACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTCAGTTTGAGCCAGCT 197216
||||||||| ||| |||||| ||| ||| | ||| |||||||| | |||||||||| |
Sbjct 1257876 CACCAGATCAAGACTGTCGCCCACGCCTGAGAGGTAGTCTTTCTTGACTTTGAGCCAG-T 1257818
Query 197217 TCT-AGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCC----AGGGTCTTGATCATC 197271
||| ||| | ||| | |||||| | | | | | |||| || |||| | ||||
Sbjct 1257817 TCTGAGAGCGCTTCGAGGGCTCGTA-GCTACTCTCAGGTCCATCGAGCATCTTAACCATC 1257759
Query 197272 AATCCCTCGCAATCTTCCTTCACGGCCTTGTTCATGAAAGTTTGAATGTCTTCCGGTTTG 197331
| || |||||| ||||||||| ||||| | || | || || || || | |
Sbjct 1257758 AGCCCTTCGCAAGACGCCTTCACGGACTTGTCAAGGAGATCCTGGATCTCGTCGAGCTCA 1257699
Query 197332 TTAG-ACATCATATCTCGCGCGAAGATAAATTGTCCCTCCACCTCCGTAAAACAACTCCT 197390
|| | | | || | ||||| |||| | ||||| || | ||| | | |
Sbjct 1257698 TTGGTGTCGCCGAACT-GAGCGAATGTAAACTCGCCCTCGACAGGAG-CGAACGATGCGT 1257641
Query 197391 -CATAAGTTCCCTCCTCTCTCTGAAGCTCTTGTTGACCTGAGACACTCCGTTCATGTACA 197449
|| || || | | ||| | ||| ||| ||||| | | ||||||| | ||| |
Sbjct 1257640 GCAGGAGGTCACGACGCTCACGGAAAGGCTTATTGACGAGGGCTTCTCCGTTGAGGTAGA 1257581
Query 197450 ACACGTCAAAAGCAAAGACGCACACCTGGACGGTTATCTCTTCTTCCTTGACATCTTTAC 197509
| ||| || || ||||| || |||| ||| | | || || ||||||| || || |
Sbjct 1257580 GGAGGTCGAATGCGAAGACACAGACCTTGACCTTGACGTCCTCGACCTTGACGTCCTTCC 1257521
Query 197510 GTTTTCTGGTCGCCAGCTTTTGAAAGGGAAGGATCTGCTTCTTCTCAACGTCCCAAGCAA 197569
|||| ||| |||| |||| || || |||| || ||||| || || ||||| ||||
Sbjct 1257520 TCTTTCGCGTCATCAGCGTTTGGAACGGCAGGACCTTCTTCTCATCGACATCCCACGCAA 1257461
Query 197570 CTGCCTCAGCGTCCAAGATGAAAGACTTCACTCCCTCGTTGATCGATTGGGGAAGCCTAT 197629
| | |||| ||| | || || |||| ||||| |||| | || || ||| | |
Sbjct 1257460 CAGTCTCACAGTCAAGGACAAAGCTCTTCGTCCCCTCCTTGACCCATGACGGTAGCTTCT 1257401
Query 197630 TGATTATGTCGGGGTACTTCTCGGTGTTATTTTCAGAGTTGCG 197672
|| ||||| || ||||||| || | ||| ||||||||
Sbjct 1257400 CGAGGATGTCCGGATACTTCTTGGAAAGGTCTTCCGAGTTGCG 1257358
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 676729354685520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |