Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04-
26] 29 sequences; 43,283,415 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq6 262 7e-65
seq4 248 2e-60
seq10 105 1e-17
>seq6
Length=2952248
Score = 262 bits (290), Expect = 7e-65
Identities = 372/517 (72%), Gaps = 11/517 (2%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | ||||| |||||||| ||||| || | | ||||||||||||
Sbjct 1057037 CTGGTAGTCACCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGTTGAGCGAGATGTTCTC 1057096
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956
||||||| ||||||||||| | ||| || | | ||| ||| | |||||
Sbjct 1057097 CATGAAGTCGAAGGGGTTGGTCGCGTTGTAGTACTTCTTGTT--GCCAAGAGCCACCAGC 1057154
Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016
||| | || |||||| |||||||||| | |||||||| || ||||||||| | |||
Sbjct 1057155 AGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGGTTGGCGTTCATGCCCAGCAGG 1057214
Query 48017 GACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076
| ||||||| || | ||||| ||||||||||| || | ||| || || | ||||
Sbjct 1057215 GCGACGGGCAGCGCATCCGTGAGGAACTCCTTCTCGATATCCACAGCCTCGGTAATAATC 1057274
Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCAT--AGAGCATGCAGG 48134
| || ||| | ||| | || | | | || | || | || | |||| |||||
Sbjct 1057275 TTCTCGACG---GCCTCAG-GGCTGGGCTTCG-ACTTGATGTGCGAGAACAGCAGGCAGG 1057329
Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194
||||||| |||||| || ||||| ||| ||||||| |||| |||||| || || |
Sbjct 1057330 CAAAGTCGGTGTGCATTCCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTAAGGCCGG 1057389
Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254
|||||| || | || ||||||||||| || | ||||||||||| ||||||||| |
Sbjct 1057390 GCATGAGACCACGCTTCTTGAGCCAGAAGATGGATGCGAAAGAGCCGCTGAAGAAGATAC 1057449
Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCC 48314
|||| || || ||||| || | || | | |||| | || ||||||||| ||||||
Sbjct 1057450 CCTCGACGGCGGCGAAGGCAATCAGACGCGAAGCGAAGGTAGAGTTCTTGTCGCAGATCC 1057509
Query 48315 AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351
|| || |||||||| ||||||||||||||||| ||
Sbjct 1057510 AGCGGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGG 1057546
>seq4
Length=4775223
Score = 248 bits (274), Expect = 2e-60
Identities = 1057/1640 (64%), Gaps = 84/1640 (5%)
Strand=Plus/Minus
Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612
|| |||||||| | || |||| ||||||| ||| || || |||||||||||||||||
Sbjct 4665259 ACAGTAAACTGAATGGGCGCAGCGGCAGCCTGGGTACGGAGGTAGTACATGCCGGTCTTG 4665200
Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTC 212669
||||| ||| ||| || | |||||| | || | || || | || | |
Sbjct 4665199 AGGCCGAGCTT---CCATCCAGCGAAGTGCATAGAGGTAATCTTGCCCATCGTAGGGTCC 4665143
Query 212670 TGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCC 212729
| |||| |||| | ||| |||||||| |||||| ||||| | |
Sbjct 4665142 T--TCAT----GTGG---------ATGTTGAGGGACTGCGACTGGTCAATGAAGGCACCA 4665098
Query 212730 CTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATT 212789
| ||| || ||||| | | ||| | ||| || || ||||| || |||||| |||
Sbjct 4665097 CGGTCGGCAGCCATCTGGACGATGGTGCGCTGAGAAAGTTCCCAGACAGTCTTGTAGAGC 4665038
Query 212790 TCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCT----GTGTATGGT 212845
| |||| ||| || || | | ||| |||| ||| | || || || | | ||| |
Sbjct 4665037 GCCTTGATGTCGTCGGGAATGTTGGGAATGTGCTGAATGGAACCGCTAGAAGCG-ATGAT 4664979
Query 212846 CAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCT-CCAGGCACTTGACCAGGT 212904
| | | ||| | || ||| || ||| |||| ||| | ||| | ||
Sbjct 4664978 GCGGTTCTT---CATCTGGTCAGACCATAG-CCCGAGGTCGACCAAGTCCTTCAGGAGCC 4664923
Query 212905 GAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGT 212964
|||||||| | |||||| ||||| | || || | | ||| | ||| || ||||
Sbjct 4664922 AGGGGTTGACAACCTGGAATTCACCGGCCAGGACGCGGCGAGAGTAGATGTTCGATGTGT 4664863
Query 212965 AGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAG 213024
| ||||||| || ||||||| || |||||||| || ||| || |||||||| |
Sbjct 4664862 AAGGCTCGAAGCACTCGTTGAAACCAAGAATCTGACTCGTCGAGGCAGTAGGCATGGGTG 4664803
Query 213025 CCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGA-GGCGCCGAAGCTCTGCCCAG 213083
| || || ||| ||| | | ||||||| | || ||| | ||| | |||||
Sbjct 4664802 CGACGAGCAGAGAGTTGCGGATACCGTGCTGAGCAATCTCGGCCTTCAGGCTAT-CCCAG 4664744
Query 213084 TCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCT 213143
||||| ||| ||| ||| | |||||||||||| |||| | ||| ||
Sbjct 4664743 TCCCAG-----AGATCGGTGGGAGTCTT----GTTCCACATGTCGTACTGGAGGATACCC 4664693
Query 213144 TTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAG 213203
| | ||||| |||||| | | || || || || |||||| ||||||
Sbjct 4664692 TGAGAGGCAGGGCTACCCTGGAACGTCTCATAAGGACCGTGGAGCTTGGCAAGCTCGATC 4664633
Query 213204 GACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCC 213263
|| || |||||||| | ||| ||||| || || |||| ||||||||| |||||||
Sbjct 4664632 GAGGCAGTGAGGGCAGCATGGTAAATGGTCTCGAAGATCTGGATGTTGAGCTGCTTGGCC 4664573
Query 213264 TCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCG 213323
|| ||||| ||| ||||| | |||| ||||||| || || | ||| ||
Sbjct 4664572 TCGGGGGAGTCGAAAGGCATGCGGAGAGCCAGGAAGGCATCAGCAAGACCATTGACACCC 4664513
Query 213324 ATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGG-AGCACTCCTCCAAGGGGTAAAAGTT 213382
| | ||||| | ||| | || ||| ||| ||| ||| || ||||| |||
Sbjct 4664512 ACCGCAATGGGGCGGTGACGCATGTTGCTCTTTCTAGC-CTCAGGCACCGGGTAGTGGTT 4664454
Query 213383 GCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTC 213442
| ||||||||||||||| | ||| ||| | ||||| | | || |
Sbjct 4664453 GATGTCGATGATCTTGTTCAAGTTCTTCACAAGCACCTGAGTGACCTCGTGGAGCT---- 4664398
Query 213443 GTGATTGAACACGTAGCCCCCGTCCTG------CACAAACTCAGGCAGGGCGATGCTGGC 213496
|| ||||| |||| |||| || ||| || || || || | | ||
Sbjct 4664397 -TG-TTGAAGTCGTAAATACCGTTCTCGACGTCCACGAAGGTCGGAAGAGCCAGGGAAGC 4664340
Query 213497 CAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTT 213556
|| |||||| ||||| || || | | | | |||||||| | ||||||| ||| |||||
Sbjct 4664339 CAAGTTGCAGACGGCGACTTCATCGGGGGCAGTGTACTCGACGATCTCGCAGCAAAGGTT 4664280
Query 213557 GCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAA-TCCTTGT 213615
|| || |||||||| || |||| ||||| ||| ||| | |||| |||||||
Sbjct 4664279 AGAGCTGCGAATGGTGCCAAGATTCTTCTGGTTGCTCTT-GCGGTTGCAGTGGTCCTTGT 4664221
Query 213616 AGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACC 213675
| | |||| ||||| || ||||| | || | | | || || | ||| || | |
Sbjct 4664220 ACAACATGAAGGGGTTGCCAGTCTCGACTTGAGCCTCGAGAATAGCGTACCACAGCTTCT 4664161
Query 213676 TGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCG 213734
||| ||| | || | || ||| | | ||||||||| |||||||| |
Sbjct 4664160 GCGCCCGGACA----GTCTCGCGGCCACGGCCCTCCTTCTCGTACTGCTCGTAGAGAGCC 4664105
Query 213735 TTGAATTCGTGGCCCCAGACC-CTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCT 213793
| ||| || | ||| | || ||| |||| ||||| || ||| ||||||||| |
Sbjct 4664104 TCGAACTCCTCGCCATACACGTCTG-CCAGACCCGGGCATTCGTTGGGGCACATGAGGGT 4664046
Query 213794 CCA-GTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGA 213852
||| || || || ||| ||| | || |||||||||||| || | ||| || ||| ||
Sbjct 4664045 CCAAGTGCCGTTCTGCTC-GACACGCTTCATGAACAGGTCGGGAATCCAGAGAGCGTAGA 4663987
Query 213853 ACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAA 213912
||||||| | | | || ||| ||| ||| ||||| || || || || |
Sbjct 4663986 ACAGGTCACGCGCGCGGACTTCCTCCTTTCCGTGGTTCTTGCGAAGGTCGAGGAAACTGA 4663927
Query 213913 AGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGC 213969
| | || |||||||||||||| | ||||||||||||||||||||| | |||| ||||
Sbjct 4663926 ACACATCGGCGTGCCACGGCTCAAGGTAGATGGCAAAGGCGCCCGGGCGCTTGTTACCGC 4663867
Query 213970 CCTGGTCCAC-CAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTG 214028
||||||| || ||| | || ||||| ||| ||| || | ||| | ||| || |||
Sbjct 4663866 CCTGGTCAACGTAGCGT-GCAGTGTTGTTGTAGACGCGGAGCATGGGAATCAGACCATTG 4663808
Query 214029 GACTG--TCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGA-- 214084
||| |||||||| || || || || ||||| ||| | || ||| ||||
Sbjct 4663807 --CTGGTGCCGTTGGTACCGGCAATGTAGCTGCCGGTGGCAC---GGATGC-GGTGGACG 4663754
Query 214085 --GAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATG 214142
||| || ||||| || ||| ||| ||||||||||||||| | | | || || |
Sbjct 4663753 TTGAGACCGATGCCTCCAGCGGTCTTAGAGATCATGGCGCAGGTCTTGAGCGTGTCGTAG 4663694
Query 214143 ATGCCGGCCATGCTGTCATC 214162
||||| | |||||||| ||
Sbjct 4663693 ATGCCCTCGATGCTGTCCTC 4663674
>seq10
Length=1499934
Score = 105 bits (116), Expect = 1e-17
Identities = 337/509 (66%), Gaps = 28/509 (6%)
Strand=Plus/Minus
Query 213564 CGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATG 213623
|||| | ||| |||| ||| ||||| |||| |||| | |||||||| |||| |
Sbjct 1070889 CGGACCGGGCCGAGGTGCTGCTGGTTGCTCTTTCTGTTGCAGGCGTCCTTGTACAGCACG 1070830
Query 213624 TAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTACCTGGCCT 213681
|| || || || ||||||| | | | || ||| |||| || | || ||||
Sbjct 1070829 CTCGGCCCGCCCGTGTCCAGCTGGGCCTCGACGAT--GGCCGTCCACAGCTCCCGCGCCT 1070772
Query 213682 TGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAAT 213740
||||| || | | | ||| | || ||||||| | ||||||||| || |||
Sbjct 1070771 TGACCGTGCGGCGGCCGCATCCC----TCGCTCTCGTACCGCTCGTAGAGCGCGCCGAAC 1070716
Query 213741 TCGTGGCCCCAGACCCT--GTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGT 213798
||| |||||| | | | | || || || || || || ||||| || ||||||
Sbjct 1070715 TCG--GCCCCATAGCAATCGACGAGCCCGGGGCACTCGGCCGGGCACATCAGCGTCCAGT 1070658
Query 213799 CCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGT 213858
| | || | ||| | | |||||||||||||||| |||||||||||| | ||| |
Sbjct 1070657 CGCGATCCGCGTCGACGCGCCGCATGAACAGGTCCGGTACCCACAGCGCGTAGCGCAGAT 1070598
Query 213859 CCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGT 213918
||| | || | ||| ||| || || | || ||| | || ||||| |||| ||
Sbjct 1070597 CCCGCGCCCGCAGCTCCTCCTTGCCGAAGCTGCGGCCCAGGTTGAGGAAGTCGAAGACGT 1070538
Query 213919 CCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTGCCGCCCTGGTCCA 213978
| |||||||||||||||| ||||| || | || || |||| | ||| ||
Sbjct 1070537 CGGCGTGCCACGGCTCCAGGTAGACAGCGAGATTGC---TACTGTTGCTG--CTGCTC-- 1070485
Query 213979 CCAGCCTGGC-CACCAT---GTTGAAGATGCGCAGGACGGGTACCA-GCCCGTTGGACTG 214033
||||| ||| | || | |||||||| |||||| | ||| || | |||| ||| | |
Sbjct 1070484 CCAGCGAGGCGCGCCGTGTCGTTGAAGACGCGCAGCATGGGCACGACGCCCTTTG--CCG 1070427
Query 214034 T-CCGTTGGTTCCCGCTATATACGAGCCG 214061
| |||| ||| || || || | |||||||
Sbjct 1070426 TCCCGTCGGTGCCGGCGATGTGCGAGCCG 1070398
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931532462319360
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