Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04-
26] 29 sequences; 43,283,415 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq3 266 4e-66
>seq3
Length=5700105
Score = 266 bits (294), Expect = 4e-66
Identities = 554/823 (67%), Gaps = 9/823 (1%)
Strand=Plus/Minus
Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120
||||| || || || | ||||| || || |||||||| || |||||||| | ||
Sbjct 1615475 GCTCTCCGCCGTCTCCGCACTGCTTGCGAGCGTGCCAAGCGCACTCTCTCCAGCTCTGCC 1615416
Query 196121 CAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACC 196180
|| || | ||||| || || ||| || || ||||||||||| || | || |||
Sbjct 1615415 CAGACCTCCATCGAGATCGACTCCCTGTACGAGGGTATTGACTTCTACACCTCGATCACC 1615356
Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAA 196240
||||| || || || ||| | | || | || | ||||| || || ||
Sbjct 1615355 CGTGCTCGCTTCGAGGAGCTCTGCCAGGACCTCTTCCGCTCCACCATGGAGCCCGTCGAG 1615296
Query 196241 CAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGA 196300
| || || |||||||| ||||| || ||||| || | || ||||| ||||| ||
Sbjct 1615295 CGTGTCCTCCGTGACGCCAAGATCGACAAGTCCTCCGTCCACGAGATTGTTCTTGTTGGT 1615236
Query 196301 GGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGAT 196360
|| ||||||||||| || ||||| || ||||| | || ||||||||| || ||
Sbjct 1615235 GGCTCAACCCGTATCCCCAAGATCCAGAAGATGGTCTCCGACTTCTTCAACGGCAAGGAG 1615176
Query 196361 TTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCT 196420
||||| | |||||||| ||||| || ||||| || ||||| ||||| ||||| |||
Sbjct 1615175 CCCAACAAGTCCATCAACCCCGATGAGGCCGTTGCCTACGGTGCTGCCGTCCAGGCCGCT 1615116
Query 196421 ATTCTCTCAGGTGTTGACAATAATAACGTCCA------AGATCTTCTGCTACTTGATGTT 196474
|| || || |||| | | || ||||| ||||| || || || || ||
Sbjct 1615115 ATCCTGTCTGGTGACACCTCTTCCAA-GTCCACCAACGAGATC--CTCCTGCTCGACGTC 1615059
Query 196475 GCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGG 196534
|| || | ||| | ||| | || || || |||||||| |||||| | || | |
Sbjct 1615058 GCTCCTCTCTCCATTGGTATCGAGACCGCTGGTGGTGTCATGACTCCTCTCATCAAGCGC 1614999
Query 196535 AACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCA 196594
||||| || || || || |||||| | ||||| || || | ||||| || || ||
Sbjct 1614998 AACACCACCATCCCCACCAAGAAGTCCGAGGTCTTCTCCACCTTCTCCGACAACCAGCCC 1614939
Query 196595 GGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTT 196654
||||| | ||| || || | || || || || | || | ||||| ||| | || ||
Sbjct 1614938 GGTGTCCTTATCCAGGTCTTCGAGGGTGAGCGTGCTCGCACCAAGGACAACAACCTGCTC 1614879
Query 196655 GGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTT 196714
|| | ||||| | || || ||||| | || ||| | |||||||| ||||| | ||
Sbjct 1614878 GGCAAGTTCGAGCTTACCGGCATTCCCCCGGCGCCCCGTGGTGTTCCCCAGATCGAGGTC 1614819
Query 196715 TGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGC 196774
||||||| | || || || || || | |||||| | ||| || |||| | |||
Sbjct 1614818 ACCTTCGATGTTGATGCCAACGGTATCATCAACGTCTCCGCTCTCGAGAAGGGCACCGGC 1614759
Query 196775 AAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAA 196834
|| | | |||||||| || ||||| |||||||| || || || |||||||| || ||
Sbjct 1614758 AAGACCAACAAGATTGTCATCACCAACGACAAGGGCCGTCTGTCCAAGGAGGAGATCGAG 1614699
Query 196835 CGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877
|||||| || || || || ||||||| || || || ||||
Sbjct 1614698 CGTATGCTTGCTGAGGCCGAGAAGTACAAGGCTGAGGATGAGG 1614656
Score = 197 bits (218), Expect = 2e-45
Identities = 390/575 (68%), Gaps = 9/575 (2%)
Strand=Plus/Minus
Query 195416 ACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATC 195475
||||| | || ||||| | || || ||||||| || ||| || |||||||| |
Sbjct 1616173 ACAGACACCGAGCGTCTGATCGGTGACTCCGCAAAGAACCAGGTCGCCATGAACCCCCAC 1616114
Query 195476 AATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAA 195535
|| || ||||| ||||| ||||| || || || |||||||| || | |||||
Sbjct 1616113 AACACCGTCTTCGACGCCAAGCGCCTGATCGGCCGCAAGTTCAACGACGCTGAGGTCCAG 1616054
Query 195536 GACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATT 195595
| |||||| ||| ||| | | | |||||| | || || |||||| | |
Sbjct 1616053 GCCGATATGAAGCACTTCCCCTTCAAGGTTGTT---GAGAAGGGTGGCAAGCCTGTTGTC 1615997
Query 195596 AATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTG 195655
| || || || | || ||| |||| || |||| || || || || || |||||
Sbjct 1615996 CAGGTCGAGTTCAAGGGCGAGGAGAAGACCTTCACTCCTGAGGAGATCTCCTCCATGGTC 1615937
Query 195656 TTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTT 195715
||| ||||||| ||||||||| || || | | | ||| || || || | || ||
Sbjct 1615936 CTGACCAAGATGAGGGAGACTGCTGAGTCCTACCTTGGTGGCACCGTCAACAACGCTGTC 1615877
Query 195716 GTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCT 195775
|| || || || || ||||||| || || || || ||||| || ||||| || | |
Sbjct 1615876 GTTACCGTCCCCGCCTACTTCAACGACTCCCAGCGCCAGGCTACCAAGGATGCCGGTCTC 1615817
Query 195776 ATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTAT 195835
|| || || || ||| || | || ||||| || || || || ||||| || || ||
Sbjct 1615816 ATCGCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCCACCGCCGCTGCCATCGCCTAC 1615757
Query 195836 GGTCTGGACAAGAACAAGGAC---GAAGATAAAAATGTATTGATCTTTGATCTCGGTGGT 195892
||||| |||||||| || | | || || || ||||||| ||||| ||||||
Sbjct 1615756 GGTCTTGACAAGAA---GGCCTCTGGCGAGCGCAACGTCCTGATCTTCGATCTGGGTGGT 1615700
Query 195893 GGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACT 195952
||||| || ||||| || || |||| ||||| | || || ||||| || ||| | |||
Sbjct 1615699 GGTACCTTCGATGTGTCGCTCCTCACCATTGAGGAGGGCATCTTCGAGGTCAAGTCCACT 1615640
Query 195953 GCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
|| ||||| ||||| || |||||||| || |||||
Sbjct 1615639 GCCGGTGACACTCACCTTGGTGGTGAGGACTTCGA 1615605
Score = 170 bits (188), Expect = 3e-37
Identities = 160/204 (78%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945
|| || || || |||||||| ||||| |||||||| ||||| ||||| ||| | || |
Sbjct 1598679 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACCATCGACAACGTGAAGAGC 1598620
Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005
||||| || ||||||||||||||||| || |||||||| || ||||| || ||||| ||
Sbjct 1598619 AAGATCCAGGATAAGGAAGGCATTCCTCCGGATCAGCAGCGTCTTATCTTCGCTGGCAAG 1598560
Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065
||||| || ||||| |||||| | | ||||||||| | || |||||||| || || |||
Sbjct 1598559 CAGCTCGAGGATGGCCGTACCTTGTCGGATTACAACATCCAGAAGGAGTCGACCCTTCAC 1598500
Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089
|| || || | || || ||||||
Sbjct 1598499 CTCGTCCTCCGCCTGCGCGGTGGT 1598476
Score = 159 bits (176), Expect = 5e-34
Identities = 175/233 (75%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||| ||||| || || || || || || || || |||||| | || |||||||
Sbjct 1598196 GTGGTATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATCACCTTGGAAGTTGAGT 1598137
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
|||| || || ||||| ||| |||| ||||||||| || ||||| || || || || |
Sbjct 1598136 CGTCGGATACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCGG 1598077
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
| ||||| || || || || || ||||| ||||| || || || || || ||| | || |
Sbjct 1598076 ACCAGCAGCGCCTGATCTTCGCGGGTAAGCAGCTGGAGGACGGTCGCACTCTCTCGGACT 1598017
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
||||| | || |||||||| ||||| ||||| || || | || || ||||||
Sbjct 1598016 ACAACATCCAGAAGGAGTCCACTCTCCACCTGGTGCTGCGTCTCCGTGGTGGT 1597964
Score = 105 bits (116), Expect = 9e-18
Identities = 232/344 (67%), Gaps = 9/344 (3%)
Strand=Plus/Plus
Query 195650 ATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGAT 195709
||||| ||| |||||||||||| ||| || | | | || | || || | |
Sbjct 4880970 ATGGTCCTGAGCAAGATGAAGGAGGTTGCCGAGAACTACCTCGGCGAGACCGTTACCAAC 4881029
Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769
|| ||||| || || || || ||||||| || | || || || || ||||||||
Sbjct 4881030 GCCGTTGTTACGGTTCCCGCCTACTTCAACGACGCCCAGCGTGCCGCCACCAAGGACGCC 4881089
Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829
| | ||||| ||||| ||| ||| | | |||| || || || ||||| || |
Sbjct 4881090 GGCACCATTGCCGGTCTCAACGTTCTCCGTGTCGTCAACGAGCCCACCGCGGCCGCTCTG 4881149
Query 195830 GCTTATGGTCTGGACAAGAA------CAAGGACGAAGATAAAAATGTATTGATCTTTGAT 195883
|| || || ||||||||||| |||| ||| || | || || | ||| |||
Sbjct 4881150 GCCTACGGCCTGGACAAGAAGGACGACAAG-ACGGAGCGCCAGATC-ATCG-TCTACGAT 4881206
Query 195884 CTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTA 195943
|||||||||||||| || ||||| || | || | | | || | ||| | ||||| ||
Sbjct 4881207 CTCGGTGGTGGTACTTTCGATGTTTCCATCCTGACTGTCGACGAGGGTGTTTTCGAGGTC 4881266
Query 195944 AAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
||||||| |||||||| || || || |||||||| || || ||
Sbjct 4881267 CAGGCTACCGCTGGTGACACCCACCTTGGTGGTGAGGACTTTGA 4881310
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657862161524880
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