Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04- 26] 29 sequences; 43,283,415 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq6 104 2e-17 >seq6 Length=2952248 Score = 104 bits (114), Expect = 2e-17 Identities = 160/226 (71%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 50502 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGC 50561 || || || || ||||| || ||||| ||||||| || | ||||| || || ||||| Sbjct 1057264 GAGGCTGTGGATATCGAGAAGGAGTTCCTCACGGATGCGCTGCCCGTCGCCCTGCTGGGC 1057205 Query 50562 ATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCAG 50621 |||||||| || | |||||| ||||||| ||||| || || ||| | || || || Sbjct 1057204 ATGAACGCCAACCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTGGTGGCT 1057145 Query 50622 CTGGGACAAC-CGAAATACTATAATGCACGTAACCCCTTTCCGTTTATGAATAACATATC 50680 || || |||| ||| ||||| || || |||||||| || ||| | ||||| || Sbjct 1057144 CTTGG-CAACAAGAAGTACTACAACGCGACCAACCCCTTCGACTTCATGGAGAACATCTC 1057086 Query 50681 GTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATAC 50726 | | | ||||| || ||||| ||||| | || || || || ||| Sbjct 1057085 GCTCAACGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGTGACTAC 1057040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488543822902800