Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04-
26] 29 sequences; 43,283,415 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq6 104 2e-17
>seq6
Length=2952248
Score = 104 bits (114), Expect = 2e-17
Identities = 160/226 (71%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 50502 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGC 50561
|| || || || ||||| || ||||| ||||||| || | ||||| || || |||||
Sbjct 1057264 GAGGCTGTGGATATCGAGAAGGAGTTCCTCACGGATGCGCTGCCCGTCGCCCTGCTGGGC 1057205
Query 50562 ATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCAG 50621
|||||||| || | |||||| ||||||| ||||| || || ||| | || || ||
Sbjct 1057204 ATGAACGCCAACCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTGGTGGCT 1057145
Query 50622 CTGGGACAAC-CGAAATACTATAATGCACGTAACCCCTTTCCGTTTATGAATAACATATC 50680
|| || |||| ||| ||||| || || |||||||| || ||| | ||||| ||
Sbjct 1057144 CTTGG-CAACAAGAAGTACTACAACGCGACCAACCCCTTCGACTTCATGGAGAACATCTC 1057086
Query 50681 GTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATAC 50726
| | | ||||| || ||||| ||||| | || || || || |||
Sbjct 1057085 GCTCAACGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGTGACTAC 1057040
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488543822902800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |