Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04-
26] 29 sequences; 43,283,415 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq3 91.5 1e-13
>seq3
Length=5700105
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/231 (70%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | ||| | ||||| || |||||| ||| || || |||||||| || ||
Sbjct 1597964 ACCACCACGGAGACGCAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGA 1598023
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||| ||||| |||| |||| || || || || || |||| |||||||| || | ||
Sbjct 1598024 GAGAGTGCGACCGTCCTCCAGCTGCTTACCCGCGAAGATCAGGCGCTGCTGGTCCGGGGG 1598083
Query 33642 CACACCTTCTTTGTCGGCAATTTT-CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| ||| || ||||| ||| || || || || | ||| | ||| || || ||
Sbjct 1598084 GATACCCTCCTTGTCCTGAATCTTGCTCTTG--ACGTTGTCGATGGTATCCGACGACTCA 1598141
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| || | ||||| || || || || | ||| || || ||||||||||||
Sbjct 1598142 ACTTCCAAGGTGATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCATA 1598192
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703883823680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |