Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04-
26] 29 sequences; 43,283,415 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq10 152 5e-32
seq6 138 1e-27
seq4 123 2e-23
>seq10
Length=1499934
Score = 152 bits (168), Expect = 5e-32
Identities = 321/467 (69%), Gaps = 19/467 (4%)
Strand=Plus/Minus
Query 147556 TGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCG 147615
||||| ||||| || | ||||| ||||| ||| | |||| | ||| ||||| || ||
Sbjct 1070871 TGCTGGTTGCTCTTTCTGTTGCAGGCGTCCTTGTACAGCACGCTCGGCCCGCCCGTGTCC 1070812
Query 147616 ACTTGCGTTTCAACGATAAACCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGG 147675
| || | || ||||| | | ||| ||| |||| ||| | || ||
Sbjct 1070811 AGCTGGGCCTCGACGATGGCCGTCCACAGCTCCCGCGCCTTGACCGTGCGGCGGCCGCAT 1070752
Query 147676 CCCTCGTTTTCGTACCGCTCGTACAAC-CGCTCAAACTCGTCGCCGTAGCAATCGGCAAG 147734
|||||| | |||||||||||||| | | ||| | |||||| | || ||||||||| | ||
Sbjct 1070751 CCCTCGCTCTCGTACCGCTCGTAGAGCGCGC-CGAACTCGGCCCCATAGCAATCGACGAG 1070693
Query 147735 GCCGGGACACTGATGCGGACACATCAGCGACCACATGTCG---TCCGCGTTAACGCGTCG 147791
||||| |||| ||| |||||||||| ||| |||| ||||||| ||||| ||
Sbjct 1070692 CCCGGGGCACTCGGCCGGGCACATCAGCGTCCA---GTCGCGATCCGCGTCGACGCGCCG 1070636
Query 147792 CATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGCA-ATCCTCGG 147850
||| ||||| ||||| |||||||||||||| ||||| ||||| ||| |||||
Sbjct 1070635 CATGAACAGGTCCGGTACCCACAGCGCGTAGCGCAGATCCCGCGC-CCGCAGCTCCTCCT 1070577
Query 147851 CGCCCATGTTGCGTTTCAAATTAAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGT 147910
||| | | |||| || || || | | ||| |||||||||||| || || | ||
Sbjct 1070576 TGCCGAAGCTGCGGCCCAGGTTGAGGAAGTCGAAGACGTCGGCGTGCCACGGCTCCAGGT 1070517
Query 147911 AGACGGCCAG--CGCACCTTTACGCT-TTCCGCCCTGGTCGACATGGCGCACCATGTTGT 147967
|||| || || || || | ||| | | ||| | ||| ||||| || ||| ||
Sbjct 1070516 AGACAGCGAGATTGCTACTGT-TGCTGCTGCTCCCAG--CGA---GGCGCGCCGTGTCGT 1070463
Query 147968 TAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTG 148014
| || ||||||| |||||| | | ||| | || || |||| ||||
Sbjct 1070462 TGAAGACGCGCAGCATGGGCACGACGCCCTTTGCCGTCCCGTCGGTG 1070416
>seq6
Length=2952248
Score = 138 bits (152), Expect = 1e-27
Identities = 250/359 (70%), Gaps = 9/359 (3%)
Strand=Plus/Minus
Query 46914 ATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCGACGAAGGACTACACACGGAC 46973
||||| ||||| || ||| |||||| | ||||| || ||||| ||| | ||||| |||
Sbjct 1057393 ATGCCCGGCCTTACCTTCTCGAACGAGCTCATCTCCCGTGACGAGGGAATGCACACCGAC 1057334
Query 46974 TTTGCGTGTCT-CTATTACAAGACGCGCGTGAATGAGAAATTAAACTCGGACACGATCCT 47032
||||| || || || || ||| | | || ||| | | | || | ||
Sbjct 1057333 TTTGCCTGCCTGCTGTTCT----CGCACATCAAGTCGAAGCCCAGCCCTGAGGCCGTCGA 1057278
Query 47033 GAGCATGTTTAGGGAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGT 47092
|| || ||| ||||| ||| ||||| |||||||| | || | |||||||||||
Sbjct 1057277 GAAGATTATTACCGAGGCTGTGGATATCGAGAAGGAGTTCCTCACGGATGCGCTGCCCGT 1057218
Query 47093 CGCCTTGCTGGGCATGAACGCACAGTCT-ATGTGCGAATATATTGAGTTTGTGGCGGATC 47151
|||| |||||||||||||||| || || |||||| | || || ||||| || || || |
Sbjct 1057217 CGCCCTGCTGGGCATGAACGC-CAACCTCATGTGCCAGTACATCGAGTTCGTCGCCGACC 1057159
Query 47152 GTCTGTTGGTGCAGCTCGGACAAC-CGAAATATTTTAATGCTCGTAATCCGTTTGAGTTT 47210
| ||| ||||| || || |||| ||| || | || || || || || || ||
Sbjct 1057158 GCCTGCTGGTGGCTCTTGG-CAACAAGAAGTACTACAACGCGACCAACCCCTTCGACTTC 1057100
Query 47211 ATGAACAACATTTCGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269
||| | ||||| |||||| | ||||| ||||| || |||||||| || || || || ||
Sbjct 1057099 ATGGAGAACATCTCGCTCAACGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGTGACTA 1057041
>seq4
Length=4775223
Score = 123 bits (136), Expect = 2e-23
Identities = 795/1259 (63%), Gaps = 39/1259 (3%)
Strand=Plus/Minus
Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGA-TACACATTGCTAGTGAAAGG 146951
||||| || || || || || ||||| || || | |||| || | || ||| ||||
Sbjct 4664917 TTGACAACCTGGAATTCACCGGCCAGGACGCGGC-GAGAGTAGATGTTCGATGTGTAAGG 4664859
Query 146952 CTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCAC 147011
||| || |||| || || | || || ||| | || ||||||||| || ||
Sbjct 4664858 CTCGAAGCACTCGTTGAAACCAAGAATCTGACTCGTCGAGGCAGTAGGCATGGGTGCGAC 4664799
Query 147012 CAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCA 147071
| || || || || | ||||| | | || | | |||||| | | |||||||||
Sbjct 4664798 GAGCAGAGAGTTGCGGATACCGTGCTGAGCAATCTCGGCCTTCAGGCTATCCCAGTCCCA 4664739
Query 147072 CA--TCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGA 147129
| ||| | ||| ||| ||||||||||||||||||||| | || || ||| ||
Sbjct 4664738 GAGATCG--GTGGGAGTCTTGTTCCACATGTCGTACTGGAGGATACCCTGAGAGGCAGGG 4664681
Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGC 147189
|| || |||||| || |||| | ||| || | || || |||
Sbjct 4664680 CTACCCTGGAACGTCTCATAAGGACCGTGGAGCTTGGCAAGCTCGATCGAGGCAGTGAGG 4664621
Query 147190 GCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCG 147249
|| ||| ||| ||||| ||| ||| || |||| || | || || | |||
Sbjct 4664620 GCAGCATGGTAAATGGTCTCGAAGATCTGGATGTTGAGCTGCTTGGCCTCGGGGGAGTCG 4664561
Query 147250 TAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGT 147309
||||||| || ||| || |||||||| || | ||| | || ||| || | || ||
Sbjct 4664560 AAAGGCATGCGGAGAGCCAGGAAGGCATCAGCAAGACCATTGACACCCACCGCAATGGGG 4664501
Query 147310 CGATGCTTTTCGTTGCTGCGCTTCGCGCTC-GCTATGGGATAGTGGTTGCGATCAATAAT 147368
|| || |||||| | || ||| | | || ||||||||| || || ||
Sbjct 4664500 CGGTGACGCATGTTGCTCTTTCTAGC-CTCAGGCACCGGGTAGTGGTTGATGTCGATGAT 4664442
Query 147369 CTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGT 147428
|||||| | ||| ||| | || | ||| | | ||| || | ||| || ||| |
Sbjct 4664441 CTTGTTCAAGTTCTTCACAAGCACCTGAGTGACCTCGTGGAGCTTGTTGAAGTCGTAAAT 4664382
Query 147429 CCCGTCTTCGACACGTACGCATTGGTTC--ACGGCGATAGACGCCAGATTGCAGACGGCC 147486
|||| ||||| ||| | ||| | || | || |||| |||||||||||
Sbjct 4664381 ACCGTTCTCGACGTCCACGAA--GGTCGGAAGAGCCAGGGAAGCCAAGTTGCAGACGGCG 4664324
Query 147487 GTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTT---GCTGCATTTTATG 147543
|| |||| | | |||||| ||||| ||| ||| ||||| ||||| | ||
Sbjct 4664323 ACTTCATCGGGGGCAGTGTACTCGACGATCTCGCAGCAAAGGTTAGAGCTGCGAATGGTG 4664264
Query 147544 ACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGT 147603
|| | ||| | ||| ||||| || || ||||| ||| ||| | | |||| | ||
Sbjct 4664263 ---CCAAGATTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAACATGAAGGGG 4664207
Query 147604 CCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTA-TGCAGGTCCTGCGCTCGCACCCG 147662
||| ||||||||||| | || | || | | || ||| | |||||| || ||
Sbjct 4664206 TTGCCAGTCTCGACTTGAGCCTCGA-GAATAGCGTACCACAGCTTCTGCGCCCGGACAGT 4664148
Query 147663 CTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTA 147722
|| || |||||||| || |||||| ||||||| | ||| ||||| ||||| ||
Sbjct 4664147 CTCGCGGCCACGGCCCTCCTTCTCGTACTGCTCGTAGAGAGCCTCGAACTCCTCGCCATA 4664088
Query 147723 GCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTT 147782
|| || || || || || | | || ||||| || | ||| || ||| | |
Sbjct 4664087 CACGTCTGCCAGACCCGGGCATTCGTTGGGGCACATGAGGGTCCAAGTGCCGTTCTGCTC 4664028
Query 147783 AACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGCA 147842
|| || ||| ||||| || || | ||| || ||||| | || || ||||| |
Sbjct 4664027 GACACGCTTCATGAACAGGTCGGGAATCCAGAGAGCGTAGAACAGGTCACGCGCGCGGAC 4663968
Query 147843 ATCCTCGGCGCCCATGTTGCGTTTCAAA--TTAAGCACGCTATAGATGTCGGCGTGCCAG 147900
||||| || ||| || | || | || | || | | |||||||||||
Sbjct 4663967 TTCCTCCTTTCCGTGGTT--CTTGCGAAGGTCGAGGAAACTGAACACATCGGCGTGCCAC 4663910
Query 147901 GGTTCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTCGACATGGCGC 147957
|| |||| ||||| ||| | || || ||| || ||||||||||| || | |||
Sbjct 4663909 GGCTCAAGGTAGATGGCAAAGGCGCCCGGGCGCTTGTTACCGCCCTGGTCAACGTAGCGT 4663850
Query 147958 ACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGT---G 148014
| ||||||| | ||||| | |||||| ||| || | ||||||||||| |
Sbjct 4663849 GCAGTGTTGTTGTAGACGCGGAGCATGGGAATCAGACCATTGCTGGTGCCGTTGGTACCG 4663790
Query 148015 GAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCGCCG 148074
| | || | ||||||| ||| || | ||| ||||| | || ||||| || ||
Sbjct 4663789 GCA---ATGTAGCTGCCGGTGGCACGGATGCGGTGGACGTTGAGACCGATGCCTCCAGCG 4663733
Query 148075 TACTTTGATATGGCAGCGCA---ATCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTC 148130
||| || || ||||| | | | |||| ||||||||| |||||||||||
Sbjct 4663732 GTCTTAGAGATCATGGCGCAGGTCTTGAGC-GTGTC--GTAGATGCCCTCGATGCTGTC 4663677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476611027228440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |