Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04- 26] 29 sequences; 43,283,415 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq6 91.5 1e-13 >seq6 Length=2952248 Score = 91.5 bits (100), Expect = 1e-13 Identities = 130/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| | || | |||||||||| | || | || ||||| || ||||| ||||| Sbjct 1057758 GCTCGACCAGGTTCTCGTTCACGATGCCATCCGACGCGGCGAAGAAAGCGAGGACGTGCG 1057817 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 | ||||| || || | |||||| || ||||||||||| | || ||||||||| | Sbjct 1057818 AGATGAAGAAGCGCTCATCGTCGTTGAGACGCTTGTTCCAGTCGTGAAGGTCCTTGGAGA 1057877 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891 ||| ||||| || | ||||| | || | | |||||||||||| ||||| |||| Sbjct 1057878 GGTCAATCTCCTCAGCAGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATTTGCC--AGAT 1057935 Query 110892 CT 110893 || Sbjct 1057936 CT 1057937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445094238653280