Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04-
26] 29 sequences; 43,283,415 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq4 98.7 1e-15
>seq4
Length=4775223
Score = 98.7 bits (108), Expect = 1e-15
Identities = 157/223 (70%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 146878 AGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTG 146937
|||| |||||| ||| || | | ||||||| | ||||| | || ||||||| |
Sbjct 1681916 AGCTCCGGGAAGTCTCGTGGCTCTCGCTCCAGCTGCACCTTCAGCGCATCGACGTGGTCG 1681975
Query 146938 AGGTAGACGTGCGCGTCCCCCAGGGTGTGC-ACAAAGTCCCCCGGCTTAAGGCCGGTCAC 146996
||||||||||||||||| |||| ||| ||| || || ||| || | ||| | ||
Sbjct 1681976 AGGTAGACGTGCGCGTCACCCATGGTATGCGTCAGCGT-CCCGGGGGTCAGGTCACAGAC 1682034
Query 146997 GTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCC 147056
||| || | ||||| ||||| || | || || |||||||| ||||| || || ||
Sbjct 1682035 GTGCGCTAGCATGTGCGTGAGAAGAGCATACGACGCAATGTTGAAAGGGACGCCGAGACC 1682094
Query 147057 CATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCG 147099
|||||| | |||| ||| || ||| |||| ||| |||||
Sbjct 1682095 CATGTCGCAAGACCGCTGATAAAGCAGGCAGTGCAGCACCCCG 1682137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583487788485600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |