Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04- 26] 29 sequences; 43,283,415 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq4 98.7 1e-15 >seq4 Length=4775223 Score = 98.7 bits (108), Expect = 1e-15 Identities = 157/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 146878 AGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTG 146937 |||| |||||| ||| || | | ||||||| | ||||| | || ||||||| | Sbjct 1681916 AGCTCCGGGAAGTCTCGTGGCTCTCGCTCCAGCTGCACCTTCAGCGCATCGACGTGGTCG 1681975 Query 146938 AGGTAGACGTGCGCGTCCCCCAGGGTGTGC-ACAAAGTCCCCCGGCTTAAGGCCGGTCAC 146996 ||||||||||||||||| |||| ||| ||| || || ||| || | ||| | || Sbjct 1681976 AGGTAGACGTGCGCGTCACCCATGGTATGCGTCAGCGT-CCCGGGGGTCAGGTCACAGAC 1682034 Query 146997 GTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCC 147056 ||| || | ||||| ||||| || | || || |||||||| ||||| || || || Sbjct 1682035 GTGCGCTAGCATGTGCGTGAGAAGAGCATACGACGCAATGTTGAAAGGGACGCCGAGACC 1682094 Query 147057 CATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCG 147099 |||||| | |||| ||| || ||| |||| ||| ||||| Sbjct 1682095 CATGTCGCAAGACCGCTGATAAAGCAGGCAGTGCAGCACCCCG 1682137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487788485600