Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04-
26] 29 sequences; 43,283,415 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq4 98.7 1e-15
>seq4
Length=4775223
Score = 98.7 bits (108), Expect = 1e-15
Identities = 302/462 (65%), Gaps = 4/462 (1%)
Strand=Plus/Minus
Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289
||||| || | || ||||| ||||| || || ||||| | |||||||| |
Sbjct 4664356 GGAAGAGCCAGGGAAGCCAAGTTGCAGACGGCGACTTCATCGGGGGCAGTGTACTCGACG 4664297
Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349
|| || || | ||| || || ||| || || | |||||| ||||| ||||| |
Sbjct 4664296 ATCTCGCAGCAAAGGTTAGAGCTGCGAATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGG 4664237
Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409
||||| |||||||| | |||| |||| | || ||||| || | | |||||||
Sbjct 4664236 TTGCAGTGGTCCTTGTACAACATGAAGGGGTTGCCAGTCTCGACTTGAGCCTCGAGAATA 4664177
Query 111410 GCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTT 111468
|| | ||| | | || ||| | || ||| | || | | || |||||| ||||||||
Sbjct 4664176 GCGTACCACAGCTTCTGCGCCCGG-ACAGTCTCGCGGCCACGGCCCTCCTTCTCGTACTG 4664118
Query 111469 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTG 111527
|||||| || || |||||||| || | |||| | ||||| || || || || |
Sbjct 4664117 CTCGTAGAGAGCCTCGAACTCCTCGCCATACACGTCTGCCAGACCCGG-GCATTCGTTGG 4664059
Query 111528 GACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCC 111587
| || | || | ||| || | ||| || ||||||||||| ||||| |||||||
Sbjct 4664058 GGCACATGAGGGTCCAAGTGCCGTTCTGCTCGACACGCTTCATGAACAGGTCGGGAATCC 4663999
Query 111588 ACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACT 111647
| || | | || || || | || | || || | || ||||| || | |
Sbjct 4663998 AGAGAGCGTAGAACAGGTCACGCGCGCGGACTTCCTCCTTTCCGTGGTTCTTGCGAAGGT 4663939
Query 111648 CAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGA 111689
| ||||| | | ||| |||||||| |||||||| ||||
Sbjct 4663938 CGAGGAAACTGAACACATCGGCGTGCCACGGCTCAAGGTAGA 4663897
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031772338400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |