Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04-
26] 29 sequences; 43,283,415 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq4 203 4e-47
seq1 87.8 2e-12
>seq4
Length=4775223
Score = 203 bits (224), Expect = 4e-47
Identities = 438/648 (68%), Gaps = 8/648 (1%)
Strand=Plus/Plus
Query 53294 CTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAG 53353
||||||||||| || || | || ||| || | |||||||| | | ||||||
Sbjct 4663614 CTGTTCAACGCCGGAACTCCCAAGCCGCAGCTGGCATCTTGCTTCCTCATCGACATGAAG 4663673
Query 53354 GATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGG 53413
|| ||| ||||| ||||||||||| ||||||||| || ||| ||||| |||
Sbjct 4663674 GAGGACAGCATCGAGGGCATCTACGACACGCTCAAGACCTGCGCCATGATCTCTAAGACC 4663733
Query 53414 TCGGGTGGTATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGG 53471
| || || |||||| || || || | || ||||||| | ||||| || |
Sbjct 4663734 GCTGGAGGCATCGGTCTCAACG--TCCACCGCATCCGTGCCACCGGCAGCTACATTGCCG 4663791
Query 53472 GGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCC 53531
| || |||||| | | |||| | | || ||||||||||||| ||||||||| || |
Sbjct 4663792 GTACCAACGGCACCAGCAATGGTCTGATTCCCATGCTCCGCGTCTACAACAACACTGCAC 4663851
Query 53532 GGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGT 53591
| ||||| ||||||| ||| |||||| ||| | || ||||||||||| |||||||
Sbjct 4663852 GCTACGTTGACCAGGGCGGTAACAAGCGCCCGGGCGCCTTTGCCATCTACCTTGAGCCGT 4663911
Query 53592 GGCACGCCGACATTATGGAGTTT-CTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATG 53650
|||||||||| | | ||||| ||||| || || ||| || || | || || |
Sbjct 4663912 GGCACGCCGA-TGTGTTCAGTTTCCTCGACCTTCGCAAGAACCACGGAAAGGAGGAAGTC 4663970
Query 53651 CGCTGCCGTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGA 53709
||| ||||||||||| ||| ||||| |||||||| ||||| |||||| | || ||
Sbjct 4663971 CGCGCGCGTGACCTGTTCTAC-GCTCTCTGGATTCCCGACCTGTTCATGAAGCGTGTCGA 4664029
Query 53710 GAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTA 53769
| || ||| ||| ||| |||||||| ||||| ||||| || || | || ||
Sbjct 4664030 GCAGAACGGCACTTGGACCCTCATGTGCCCCAACGAATGCCCGGGTCTGGCAGACGTGTA 4664089
Query 53770 CGGTGAGGAGTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAA 53829
|| |||||||| | | | || | ||||| ||||||| | |||
Sbjct 4664090 TGGCGAGGAGTTCGAGGCTCTCTACGAGCAGTACGAGAAGGAGGGCCGTGGCCGCGAGAC 4664149
Query 53830 GGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCC 53889
||| ||||| || | ||| | || || ||| || || || ||||| || | ||
Sbjct 4664150 TGTCCGGGCGCAGAAGCTGTGGTACGCTATTCTCGAGGCTCAAGTCGAGACTGGCAACCC 4664209
Query 53890 GTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAA 53937
| ||||| |||||||| |||| |||||||||||||||||
Sbjct 4664210 CTTCATGTTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAA 4664257
>seq1
Length=6723813
Score = 87.8 bits (96), Expect = 2e-12
Identities = 181/267 (68%), Gaps = 2/267 (1%)
Strand=Plus/Minus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
||| |||||||||||| ||| |||||||| || ||||| | || | |||||| |
Sbjct 4133593 GTGTAAATGTAACGAGCGCTGGCAGCATCATTACCACCCTGGATGCGAGAACCGAAGTTG 4133534
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
|| || ||||||| |||||| | |||||||| || |||||||| || || | | ||
Sbjct 4133533 CCGCTGGGCTCCAGGAGGTTGATGTTGTTGGAACCGACAAAGTTCTGTGCGAGGCCAACG 4133474
Query 117425 ATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCC-ACGTAGCC 117483
||||| || ||| || || |||| || |||| ||| || ||| | ||
Sbjct 4133473 ATCGTTTGCTGAAGGGAGGCATCGCCATACGCGTAGTTCGTC-AATCCTCCTACGAAACC 4133415
Query 117484 CGCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCAC 117543
|| || | ||||||||||| | |||||| |||||| || | ||| | ||
Sbjct 4133414 TGCGAGTTCGTTGACCTTCATGTCCCTTTTAAGGTTCCTCTTGAAACAAGTATACAGGAC 4133355
Query 117544 CTTGCGCTGACTTGGCTTCAGACCATC 117570
||||| |||| ||||| | ||| ||
Sbjct 4133354 TTTGCGTTGACCGGGCTTGAAACCGTC 4133328
Score = 87.8 bits (96), Expect = 2e-12
Identities = 182/267 (68%), Gaps = 8/267 (3%)
Strand=Plus/Minus
Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935
|| || ||||| || |||||||||||||| |||||||| || | || || | || |
Sbjct 4133746 CCCGTGCCGATACCATCTGCACCGTTGACAAGAATCATTGGAAGGATTGGCACATACATG 4133687
Query 151936 TCCGGCTCCACCTGTTGACCGTCATCC--ATCACGTATTTCAA--AACGGAATTGTCAGC 151991
|||||| | | | | || |||||| |||| | || | | ||| | ||| ||
Sbjct 4133686 GTCGGCTCGATCGGCTTTCCATCATCCTGATCATG---CTCGAGGAGCGG-CTCGTCCGC 4133631
Query 151992 CGGATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGC 152051
| || ||| || || |||| |||||| || | |||| | ||||| || | ||||||
Sbjct 4133630 CACATGGAAGATGCGGCGAGCGATAGGAGACAGTCTCGTGTAAATGTAACGAGCGCTGGC 4133571
Query 152052 CGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAG 152111
||||| || ||||| | || | || || | || |||||| ||||||||||
Sbjct 4133570 AGCATCATTACCACCCTGGATGCGAGAACCGAAGTTGCCGCTGGGCTCCAGGAGGTTGAT 4133511
Query 152112 GTTGTTGGCGCCCACGAAATTCTGAGC 152138
|||||||| || || || ||||| ||
Sbjct 4133510 GTTGTTGGAACCGACAAAGTTCTGTGC 4133484
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215801634200
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