Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04-
26] 29 sequences; 43,283,415 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq4 96.9 3e-15
>seq4
Length=4775223
Score = 96.9 bits (106), Expect = 3e-15
Identities = 138/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 29624 GGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCT 29683
||||| | ||| ||||| | | |||||| || |||||||| ||||||||||| || ||
Sbjct 1681934 GGCTCTCGCTCCAGCTGCACCTTCAGCGCATCGACGTGGTCGAGGTAGACGTGCGCGTCA 1681993
Query 29684 CCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 29742
|||| ||| || | || || | || || || | |||||| || | ||||| |||
Sbjct 1681994 CCCATGGTATGCGTCAGCGTCCCGGGGGTC-AGGTCACAGACGTGCGCTAGCATGTGCGT 1682052
Query 29743 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTG 29802
||| |||| || || ||||| || || || ||||| |||||||| | |||| |||
Sbjct 1682053 GAGAAGAGCATACGACGCAATGTTGAAAGGGACGCCGAGACCCATGTCGCAAGACCGCTG 1682112
Query 29803 GTAGAGCTGGCA 29814
|| ||| ||||
Sbjct 1682113 ATAAAGCAGGCA 1682124
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406163056446694
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |