Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasiodiplodia_20theobromae_20[genbank_20GCA_5F002111425.1_202017-04- 26] 29 sequences; 43,283,415 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq4 96.9 3e-15 >seq4 Length=4775223 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 29624 GGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCT 29683 ||||| | ||| ||||| | | |||||| || |||||||| ||||||||||| || || Sbjct 1681934 GGCTCTCGCTCCAGCTGCACCTTCAGCGCATCGACGTGGTCGAGGTAGACGTGCGCGTCA 1681993 Query 29684 CCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 29742 |||| ||| || | || || | || || || | |||||| || | ||||| ||| Sbjct 1681994 CCCATGGTATGCGTCAGCGTCCCGGGGGTC-AGGTCACAGACGTGCGCTAGCATGTGCGT 1682052 Query 29743 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTG 29802 ||| |||| || || ||||| || || || ||||| |||||||| | |||| ||| Sbjct 1682053 GAGAAGAGCATACGACGCAATGTTGAAAGGGACGCCGAGACCCATGTCGCAAGACCGCTG 1682112 Query 29803 GTAGAGCTGGCA 29814 || ||| |||| Sbjct 1682113 ATAAAGCAGGCA 1682124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406163056446694