Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq222 187 3e-42 seq64 143 3e-29 seq365 131 2e-25 seq124 123 3e-23 >seq222 Length=676535 Score = 187 bits (206), Expect = 3e-42 Identities = 215/286 (75%), Gaps = 5/286 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||| |||||| ||||||||||| | |||||| | ||||| Sbjct 131215 ATTTGGCAAATGTACAAGAAGCACGAGGCTTCGTTCTGGACTGCCGAGGAAATTGACCTC 131274 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| | ||||||| | ||| ||||||| | ||||| ||| || | Sbjct 131275 TCCAAGGATCTGCACGACTGGAACAACCGCCTGAACGATGATGAGCGGTTCTTCGTCTCG 131334 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||| | ||||| || || |||||| |||||||| ||||||||||| || || ||||| Sbjct 131335 CACATTCTGGCATTCTTTGCCGCCTCTGACGGCATTGTCAACGAGAACCTTGTTGAGCGC 131394 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || | ||||| |||||| | ||||| || |||||||||||||| |||||| || Sbjct 131395 TTCAGCGC-CGAGGTTCAGGTGCCAGAGGCTCGCTGCTTCTACGGCTTCCAGATCATGAT 131453 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 ||||||||| |||||||| | || || || |||||||| ||| Sbjct 131454 GGAGAACGTCCACTCGGAGACTTACTCCCTGCTTATCGACACCTAC 131499 Score = 181 bits (200), Expect = 1e-40 Identities = 314/454 (69%), Gaps = 2/454 (0%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||| ||||| ||| |||||| | | | | ||| || |||||| | ||||| Sbjct 131619 AGAAGGCCGACTGGGCTCTGAAGTGGATCTCGGACCGTGAGTCCTCCTTCGCCCAGCGCT 131678 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 |||| || ||||| ||||| ||||| | ||||| || |||| || |||| || | Sbjct 131679 TGGTCGCTTTCGCCGCCGTTGAGGGTATTTTCTTCAGCGGGGCTTTCTCCTCCATCTTCT 131738 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 || | ||||| || ||||| ||||| |||||||| ||| |||||||| || || | | Sbjct 131739 GGTTGAAGAAGCGTGGCCTGATGCCTGGCCTGACATTCTCGAACGAGCTTATTTCTCGTG 131798 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 ||||||| ||||| |||||||||||| |||| ||| |||| | | | || |||| Sbjct 131799 ACGAGGGCCTGCACACCGACTTTGCCTGCCTGCTCTTCTCGCATCTCAAGAACCGCCCGA 131858 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 || | || || ||| ||| | ||| || ||| || |||||| ||||| | Sbjct 131859 GCAAGCAGCTGATCGAGGATATCATTGTCGATGCTGTCAAGATTGAGCAGGAGTTCCTGA 131918 Query 117282 CCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATC 117340 |||| ||||| || |||| ||| || || | || | | ||| ||||||||| Sbjct 131919 CCGAGGCGCTTCC-CTGCGCTCTTCTCGGCATGAACTCCACCCTCATGAAGCAATACATT 131977 Query 117341 GAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCC 117400 |||||||| |||||| | || ||| | | || | | | |||| ||| | | || Sbjct 131978 GAGTTCGTTGCCGACCGCCTACTGGTTGCTCTTGGCAATGACAAGGTGTACCGCTCCACC 132037 Query 117401 AACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434 ||||| | ||||| ||| | ||||||| ||| Sbjct 132038 AACCCCTTCGACTTCATGGAGAACATCTCCCTGG 132071 >seq64 Length=19946 Score = 143 bits (158), Expect = 3e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || |||||||| ||||||||| | || ||||| || | Sbjct 14479 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGAGCAGC 14420 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | ||||| || |||| |||||||||||||||||| | |||||| Sbjct 14419 GACACAATCGACAATGTCAAGTCCAAGATTCAGGACAAAGAGGGCATCCCCCCTGACCAG 14360 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || || | |||||| || |||||||| || | || || ||| ||||||||| Sbjct 14359 CAGCGCCTGATTTTCGCGGGAAAGCAGCTGGAGGATGGTCGGACTCTCTCTGACTACAAC 14300 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCG 40918 ||||| |||||| |||||| || || ||| | || | | ||||||| Sbjct 14299 ATCCAAAAGGAGAGCACGCTCCACCTGGTGCTTCGGCTCCGTGGCGGCG 14251 >seq365 Length=144107 Score = 131 bits (144), Expect = 2e-25 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || |||||||| || ||||| | || ||||| | | Sbjct 48252 ATGCAGATCTTTGTCAAGACTCTGACGGGCAAGACGATCACTCTTGAGGTCGAGTCGTCG 48193 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || |||| |||||||||||||| ||| | || || Sbjct 48192 GACACGATCGACAACG-TCAAGAGCAAGATTCAGGACAAAGAGGGCATTCCCCCCGATCA 48134 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||| | ||| ||||| ||||| || || | ||| || || ||||||||| Sbjct 48133 GCAGCGTCTCATTTTCGCTGGCAAGCAGCTTGAGGATGGGCGGACGCTTTCCGACTACAA 48074 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||| ||||||||| | ||||||||||| ||| Sbjct 48073 CATTCAGAAGGAGTCTACGCTGCATCTGGTG 48043 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || |||||||| || ||||| |||||||| | || || ||| | | Sbjct 48480 ATGCAGATCTTTGTCAAAACGCTTACCGGCAAGACCATCACACTAGAGGTTGAATCGTCG 48421 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || |||| |||||||||||||| ||| | || || Sbjct 48420 GACACGATAGACAACG-TCAAGAGCAAGATTCAGGACAAAGAGGGCATTCCCCCCGATCA 48362 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||| | ||| ||||| ||||| || |||| || || || ||| ||||| Sbjct 48361 GCAGCGCCTCATTTTCGCTGGCAAGCAGCTCGAGGACGGTCGGACGCTATCCGATTACAA 48302 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| | ||||| || || || |||| Sbjct 48301 CATCCAGAAGGAGTCGACGCTCCACCTCGTCCTGCG 48266 Score = 122 bits (134), Expect = 9e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||| | || || || || || || | || || || || | Sbjct 47796 ATGCAGATCTTCGTCAAGACGTTGACAGGAAAGACGATTACGCTTGAGGTGGAGTCCTCG 47737 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | || || | ||||| || || | ||||| ||||||||||| | ||||| Sbjct 47736 GATACGATTGACAATG-TCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCGCCAGACCA 47678 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || ||||| |||||||| |||| ||||| || |||||||| Sbjct 47677 GCAGCGGCTGATCTTTGCTGGCAAGCAGCTGGAGGACGGACGCACACTTTCGGACTACAA 47618 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| | |||||||| || ||| |||| || | |||||| Sbjct 47617 CATCCAGAAGGAGTCAACGCTGCACCTGGTGCTGCGTCTGCGTGGCGGC 47569 Score = 116 bits (128), Expect = 4e-21 Identities = 171/238 (72%), Gaps = 7/238 (3%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || |||||||||||||| || || || | || || || | | Sbjct 48024 ATGCAGATCTTTGTGAAGACGCTCACGGGCAAGACGATTACGTTGGAGGTGGAGTCGTCA 47965 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || || | | ||| ||| || | ||||| ||||| ||||| | ||||| Sbjct 47964 GACACGATTGACAATG-TGAAGTCAAAGATCCAAGACAAGGAGGGTATCCCGCCAGACCA 47906 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || ||||| || ||||| || | ||||||||| |||||||| Sbjct 47905 GCAGCGTCTGATCTTTGCAGGCAAGCAACTGGAGGATGGGCGCACCCTGTCGGACTACAA 47846 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG-CTTGAGGGGCGGCGGCTTGCA 40925 ||| |||||||| | |||||||| | ||| |||| ||| |||||||| |||| Sbjct 47845 CATTCAGAAGGAATCGACGCTGCACTTGGTGCTGCGTCTT----CGCGGCGGCATGCA 47792 >seq124 Length=325275 Score = 123 bits (136), Expect = 3e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| ||||||||| | || ||||| || | |||| | Sbjct 289615 TTCGTGAAGACCCTTACGGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 289556 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| ||||||||||| | |||||||| || || Sbjct 289555 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAGCAGCGCCTG 289496 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 || | || ||||| ||||| || |||| || ||||| |||||||||||||||||| Sbjct 289495 ATTTTTGCTGGCAAGCAGCTCGAGGACGGCCGGACCCTGTCGGACTACAACATCCAGAAG 289436 Query 40879 GAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||| | || ||||| || ||| | ||| || | || || Sbjct 289435 GAGTCGACCCTGCACCTGGTGCTCCGCCTGCGTGGTGG 289398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515216553061360