Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq365 145 7e-30 seq64 125 6e-24 seq401 109 5e-19 seq124 96.9 3e-15 >seq365 Length=144107 Score = 145 bits (160), Expect = 7e-30 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| || | |||||||| || ||||||||||| ||| | || ||| |||||| Sbjct 48043 CACCAGATGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGCGTCCGCCCATCCTC 48102 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || |||||| | |||||||||||||||||||| || |||||||| ||||| Sbjct 48103 AAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCTTTGTCCTG 48162 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || | |||| ||||||| ||||||||| | || | ||| || Sbjct 48163 AATCTTGCTCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCAAGAGTGATCGTCTT 48222 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| |||||||| || ||||| |||||||| Sbjct 48223 GCCCGTCAGAGTCTTGACAAAGATCTGCAT 48252 Score = 118 bits (130), Expect = 9e-22 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||||||| | || || ||||||||||| Sbjct 48277 GTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGATAGCGTCCGACCGTCCTCGAGCTG 48336 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || |||||| | ||||| |||||||||||||| || |||||||| ||||| ||| || Sbjct 48337 CTTGCCAGCGAAAATGAGGCGCTGCTGATCGGGGGGAATGCCCTCTTTGTCCTGAATCTT 48396 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | || | ||||||| || ||||| | || | || |||||||| Sbjct 48397 GCTCTTGACGTTGTCTATCGTGTCCGACGATTCAACCTCTAGTGTGATGGTCTTGCCGGT 48456 Query 118715 CAGAGTTTTTACAAAAATCTGCATG 118739 || ||||| ||||| ||||||||| Sbjct 48457 AAGCGTTTTGACAAAGATCTGCATG 48481 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| | | || ||||||||| | || || || || ||||||||||| || | Sbjct 47798 CCGCCGCGAAGACGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCCGAC 47857 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | |||||| |||||| || || || || || |||| ||||||||||| || || || Sbjct 47858 AGGGTGCGCCCATCCTCCAGTTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCTGGCGGG 47917 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || |||||||||||| || ||| || || | || | ||||| | ||| ||| Sbjct 47918 ATACCCTCCTTGTCTTGGATCTTTGACTTCACATTGTCAATCGTGTCTGACGACTCCACC 47977 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || | || | ||| ||||| || || || || ||||| ||||||||| Sbjct 47978 TCCAACGTAATCGTCTTGCCCGTGAGCGTCTTCACAAAGATCTGCATG 48025 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/216 (70%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA-- 118583 || ||||| ||| | || ||||| || || |||||||| || | |||| |||| Sbjct 47584 CAGCACCAGGTGCAGCGTTGACTCCTTCTGGATGTTGTAGTCCG--AAAGTGTGCGTCCG 47641 Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 ||||| ||||| || ||||| |||| || |||||||| || || || |||||||||||| Sbjct 47642 TCCTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCTGGCGGGATGCCCTCCTTG 47701 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || || || || || | || | || |||| | ||| ||||| | || | | Sbjct 47702 TCCTGGATCTTCGACTTGACATTGTCAATCGTATCCGAGGACTCCACCTCAAGCGTAATC 47761 Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || || || |||| || || || || ||||||||| Sbjct 47762 GTCTTTCCTGTCAACGTCTTGACGAAGATCTGCATG 47797 >seq64 Length=19946 Score = 125 bits (138), Expect = 6e-24 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||||| || ||| ||||| |||||||| || | ||| || |||||| Sbjct 14270 CACCAGGTGGAGCGTGCTCTCCTTTTGGATGTTGTAGTCAGAGAGAGTCCGACCATCCTC 14329 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| ||||| ||| | || || |||||||| || || || |||||||| ||||| Sbjct 14330 CAGCTGCTTTCCCGCGAAAATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTG 14389 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || | |||| ||||| ||||||||||||| | ||| | || || Sbjct 14390 AATCTTGGACTTGACATTGTCGATTGTGTCGCTGCTCTCGACCTCAAGGGTGATGGTCTT 14449 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 ||| ||||| || || || || |||||||||||| Sbjct 14450 GCCCGTCAGGGTCTTCACGAAGATCTGCATGGCT 14483 >seq401 Length=585928 Score = 109 bits (120), Expect = 5e-19 Identities = 338/518 (65%), Gaps = 19/518 (4%) Strand=Plus/Plus Query 133219 ACTGGTTGACCACTTGAAACTCGCCGGCGAGAACGCGTCT-GAGATATACATTCGACGTG 133277 || |||||||||| || |||||||| || || || || | ||| || | || |||||| Sbjct 360495 ACGGGTTGACCACCTGGAACTCGCCCGCCAGCACACGGCGCGAG-TAGATGTTGGACGTG 360553 Query 133278 AACGGTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATGTAC 133337 |||| ||||| | ||||||||||| || ||||||| ||||| ||| || |||||| Sbjct 360554 TACGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTCGACGCTGTCGGCATGGGG 360613 Query 133338 GCCACCAACAAAGAGTTTCTTACGCCGTACTTGTTTATGTTGCACTGCAATTCGTTCCAG 133397 ||||||| || | ||| | ||||||| || || || || ||| || |||| Sbjct 360614 GCCACCAGCAGACTGTTGCGCACGCCGTGCTCCTTAATCTTCAGACGCAGCGAGTCCCAG 360673 Query 133398 TCCCACAGATTGTTGGAATGATAGACGCCGTTCTCGTCGTCGTAGTTGTGAAAATGCAAA 133457 |||||||| | ||||| | ||| |||| | ||| |||| | Sbjct 360674 TCCCACAG-----------GTCAGACGGC-TTC---ACGTCCCACATGTCGGGTTGCAGA 360718 Query 133458 ATACCCCTGCTCACCGGACTGTCCGTGTACGATTCATAGGGTCCGTTGATTTTGGCCAGC 133517 || ||| ||| ||| | || ||||| |||| || | ||| |||||||| Sbjct 360719 ATGCCCTGAGACACGGGAGAGCCCTCGTACGTCGAGTAGGTGCCCTCGATCTTGGCCAGA 360778 Query 133518 TCGCAGCTAGCCTCCAAAGCGGCAAAGTAAATGGTTTCCGCGATTGAATAGTTGACGAAC 133577 ||||| ||| || |||||| ||||||||| || |||| | ||||| Sbjct 360779 TCGCACGACGCCGTCAGAGCGGCGTGGTAAATGGTCTCAAAGATTTGCTTGTTGAGCTCA 360838 Query 133578 CTGGCATCGTCGCTA-TCGTAGGCGATGTCGAGAAGAACAAACGCGTCGGCCAAACCCTG 133636 | ||| ||| || | ||| ||| ||| ||| | || || || |||| ||||| Sbjct 360839 CGGGCCTCG-GGCGACTCGAAGGGCATGCGCAGAGCCAAGAAGGCATCCGCCAGTCCCTG 360897 Query 133637 TATGCCGACGCCGATGGGTCGATGTTTTTTATTGCTCCTCTCCGACTCGGCCGTGGGATA 133696 | || | ||||| || ||||| | ||||| ||| | ||| | | || || Sbjct 360898 CACACCCAGACCGATAGGCCGATGGCGCATGTTGCTGTTCTTGGCCTCCGGCACAGGGTA 360957 Query 133697 GTGGTTGACGTCGATGATCTTGTTGAGATTGCGGACGA 133734 || ||||||||| |||| | ||| || |||||||||| Sbjct 360958 GTAGTTGACGTCAATGACGTGGTTCAGGTTGCGGACGA 360995 >seq124 Length=325275 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||| | || ||||| || || |||||||| || || || || ||||| Sbjct 289415 CACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGACAGGGTCCGGCCGTCCTC 289474 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || ||||| | || || |||||||| ||||| || |||||||||||||| Sbjct 289475 GAGCTGCTTGCCAGCAAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTG 289534 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| ||||||| | ||||||||| | ||| | || || Sbjct 289535 GATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTT 289594 Query 118709 GCCGGTCAGAGTTTTTACAAA 118729 ||| || || || || || || Sbjct 289595 GCCCGTAAGGGTCTTCACGAA 289615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433828226916412