Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq365 145 7e-30
seq64 125 6e-24
seq401 109 5e-19
seq124 96.9 3e-15
>seq365
Length=144107
Score = 145 bits (160), Expect = 7e-30
Identities = 158/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| || | |||||||| || ||||||||||| ||| | || ||| ||||||
Sbjct 48043 CACCAGATGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGCGTCCGCCCATCCTC 48102
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || |||||| | |||||||||||||||||||| || |||||||| |||||
Sbjct 48103 AAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCTTTGTCCTG 48162
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || || || | |||| ||||||| ||||||||| | || | ||| ||
Sbjct 48163 AATCTTGCTCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCAAGAGTGATCGTCTT 48222
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||| |||||||| || ||||| ||||||||
Sbjct 48223 GCCCGTCAGAGTCTTGACAAAGATCTGCAT 48252
Score = 118 bits (130), Expect = 9e-22
Identities = 149/205 (73%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || || |||||||||||| | || || |||||||||||
Sbjct 48277 GTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGATAGCGTCCGACCGTCCTCGAGCTG 48336
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| |||||| | ||||| |||||||||||||| || |||||||| ||||| ||| ||
Sbjct 48337 CTTGCCAGCGAAAATGAGGCGCTGCTGATCGGGGGGAATGCCCTCTTTGTCCTGAATCTT 48396
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | || | ||||||| || ||||| | || | || ||||||||
Sbjct 48397 GCTCTTGACGTTGTCTATCGTGTCCGACGATTCAACCTCTAGTGTGATGGTCTTGCCGGT 48456
Query 118715 CAGAGTTTTTACAAAAATCTGCATG 118739
|| ||||| ||||| |||||||||
Sbjct 48457 AAGCGTTTTGACAAAGATCTGCATG 48481
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|| ||||| | | || ||||||||| | || || || || ||||||||||| || |
Sbjct 47798 CCGCCGCGAAGACGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCCGAC 47857
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| |||||| |||||| || || || || || |||| ||||||||||| || || ||
Sbjct 47858 AGGGTGCGCCCATCCTCCAGTTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCTGGCGGG 47917
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| |||||||||||| || ||| || || | || | ||||| | ||| |||
Sbjct 47918 ATACCCTCCTTGTCTTGGATCTTTGACTTCACATTGTCAATCGTGTCTGACGACTCCACC 47977
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| | || | ||| ||||| || || || || ||||| |||||||||
Sbjct 47978 TCCAACGTAATCGTCTTGCCCGTGAGCGTCTTCACAAAGATCTGCATG 48025
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/216 (70%), Gaps = 4/216 (2%)
Strand=Plus/Plus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA-- 118583
|| ||||| ||| | || ||||| || || |||||||| || | |||| ||||
Sbjct 47584 CAGCACCAGGTGCAGCGTTGACTCCTTCTGGATGTTGTAGTCCG--AAAGTGTGCGTCCG 47641
Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643
||||| ||||| || ||||| |||| || |||||||| || || || ||||||||||||
Sbjct 47642 TCCTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCTGGCGGGATGCCCTCCTTG 47701
Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703
|| || || || || | || | || |||| | ||| ||||| | || | |
Sbjct 47702 TCCTGGATCTTCGACTTGACATTGTCAATCGTATCCGAGGACTCCACCTCAAGCGTAATC 47761
Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| || || |||| || || || || |||||||||
Sbjct 47762 GTCTTTCCTGTCAACGTCTTGACGAAGATCTGCATG 47797
>seq64
Length=19946
Score = 125 bits (138), Expect = 6e-24
Identities = 156/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| ||||| || ||| ||||| |||||||| || | ||| || ||||||
Sbjct 14270 CACCAGGTGGAGCGTGCTCTCCTTTTGGATGTTGTAGTCAGAGAGAGTCCGACCATCCTC 14329
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| ||||| ||| | || || |||||||| || || || |||||||| |||||
Sbjct 14330 CAGCTGCTTTCCCGCGAAAATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTG 14389
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || || || | |||| ||||| ||||||||||||| | ||| | || ||
Sbjct 14390 AATCTTGGACTTGACATTGTCGATTGTGTCGCTGCTCTCGACCTCAAGGGTGATGGTCTT 14449
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
||| ||||| || || || || ||||||||||||
Sbjct 14450 GCCCGTCAGGGTCTTCACGAAGATCTGCATGGCT 14483
>seq401
Length=585928
Score = 109 bits (120), Expect = 5e-19
Identities = 338/518 (65%), Gaps = 19/518 (4%)
Strand=Plus/Plus
Query 133219 ACTGGTTGACCACTTGAAACTCGCCGGCGAGAACGCGTCT-GAGATATACATTCGACGTG 133277
|| |||||||||| || |||||||| || || || || | ||| || | || ||||||
Sbjct 360495 ACGGGTTGACCACCTGGAACTCGCCCGCCAGCACACGGCGCGAG-TAGATGTTGGACGTG 360553
Query 133278 AACGGTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATGTAC 133337
|||| ||||| | ||||||||||| || ||||||| ||||| ||| || ||||||
Sbjct 360554 TACGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTCGACGCTGTCGGCATGGGG 360613
Query 133338 GCCACCAACAAAGAGTTTCTTACGCCGTACTTGTTTATGTTGCACTGCAATTCGTTCCAG 133397
||||||| || | ||| | ||||||| || || || || ||| || ||||
Sbjct 360614 GCCACCAGCAGACTGTTGCGCACGCCGTGCTCCTTAATCTTCAGACGCAGCGAGTCCCAG 360673
Query 133398 TCCCACAGATTGTTGGAATGATAGACGCCGTTCTCGTCGTCGTAGTTGTGAAAATGCAAA 133457
|||||||| | ||||| | ||| |||| | ||| |||| |
Sbjct 360674 TCCCACAG-----------GTCAGACGGC-TTC---ACGTCCCACATGTCGGGTTGCAGA 360718
Query 133458 ATACCCCTGCTCACCGGACTGTCCGTGTACGATTCATAGGGTCCGTTGATTTTGGCCAGC 133517
|| ||| ||| ||| | || ||||| |||| || | ||| ||||||||
Sbjct 360719 ATGCCCTGAGACACGGGAGAGCCCTCGTACGTCGAGTAGGTGCCCTCGATCTTGGCCAGA 360778
Query 133518 TCGCAGCTAGCCTCCAAAGCGGCAAAGTAAATGGTTTCCGCGATTGAATAGTTGACGAAC 133577
||||| ||| || |||||| ||||||||| || |||| | |||||
Sbjct 360779 TCGCACGACGCCGTCAGAGCGGCGTGGTAAATGGTCTCAAAGATTTGCTTGTTGAGCTCA 360838
Query 133578 CTGGCATCGTCGCTA-TCGTAGGCGATGTCGAGAAGAACAAACGCGTCGGCCAAACCCTG 133636
| ||| ||| || | ||| ||| ||| ||| | || || || |||| |||||
Sbjct 360839 CGGGCCTCG-GGCGACTCGAAGGGCATGCGCAGAGCCAAGAAGGCATCCGCCAGTCCCTG 360897
Query 133637 TATGCCGACGCCGATGGGTCGATGTTTTTTATTGCTCCTCTCCGACTCGGCCGTGGGATA 133696
| || | ||||| || ||||| | ||||| ||| | ||| | | || ||
Sbjct 360898 CACACCCAGACCGATAGGCCGATGGCGCATGTTGCTGTTCTTGGCCTCCGGCACAGGGTA 360957
Query 133697 GTGGTTGACGTCGATGATCTTGTTGAGATTGCGGACGA 133734
|| ||||||||| |||| | ||| || ||||||||||
Sbjct 360958 GTAGTTGACGTCAATGACGTGGTTCAGGTTGCGGACGA 360995
>seq124
Length=325275
Score = 96.9 bits (106), Expect = 3e-15
Identities = 142/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| ||| | || ||||| || || |||||||| || || || || |||||
Sbjct 289415 CACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGACAGGGTCCGGCCGTCCTC 289474
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || ||||| | || || |||||||| ||||| || ||||||||||||||
Sbjct 289475 GAGCTGCTTGCCAGCAAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTG 289534
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| ||||||| | ||||||||| | ||| | || ||
Sbjct 289535 GATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTT 289594
Query 118709 GCCGGTCAGAGTTTTTACAAA 118729
||| || || || || || ||
Sbjct 289595 GCCCGTAAGGGTCTTCACGAA 289615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433828226916412
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |