Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq365 143 2e-29
seq124 125 5e-24
seq64 123 2e-23
>seq365
Length=144107
Score = 143 bits (158), Expect = 2e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | |||||||| ||| | || ||| ||||| ||||||||||| |||
Sbjct 47798 CCGCCGCGAAGACGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCCGAC 47857
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGG 34281
|| || | || |||| ||||||||||| || || || ||||||||||| | ||||
Sbjct 47858 AGGGTGCGCCCATCCTCCAGTTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCTGGCGGG 47917
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| | ||||||||| |||||| ||| | || | | |||| || | ||| || ||
Sbjct 47918 -ATACCCTCCTTGTCTTGGATCTTTGACTTCACATTGTCAATCGTGTCTGACGACTCCAC 47976
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| ||| || || ||||| ||||| || |||||||||||||||||
Sbjct 47977 CTCCAACGTAATCGTCTTGCCCGTGAGCGTCTTCACAAAGATCTGCAT 48024
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | ||| || ||||| | || || ||||| |||||||| |||||
Sbjct 48254 CCACCACGCAGACGCAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGAT 48313
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
||| || |||| || | ||||||||| ||||||||||| |||||||| ||| |||
Sbjct 48314 AGCGTCCGACCGTCCTCGAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGATCGGGGGGA 48373
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||| ||||| ||||| ||| | | | |||||| || | |||||| ||
Sbjct 48374 ATGCCCTCTTTGTCCTGAATCTTGCTCTTGACGTTGTCTATCGTGTCCGACGATTCAACC 48433
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | |||||||| |||||||| || ||||| ||||||||||||||
Sbjct 48434 TCTAGTGTGATGGTCTTGCCGGTAAGCGTTTTGACAAAGATCTGCAT 48480
Score = 131 bits (144), Expect = 1e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|||||||| || | ||| || ||||| |||||||||||||| ||| || | ||
Sbjct 48041 AGCACCAGATGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGCGTCCGCCCATCC 48100
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||||||||| ||||||||||| |||||||| ||| ||| | || ||| |||||
Sbjct 48101 TCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCTTTGTCC 48160
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | | |||| || | ||| ||||| || | ||||| ||
Sbjct 48161 TGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCAAGAGTGATCGTC 48220
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||||| || ||||| || ||||||||||||||
Sbjct 48221 TTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 48252
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| ||||| | |||||||||||| | || || ||||| ||||||||||| ||
Sbjct 47570 CCGCCACGCAGACGCAGCACCAGGTGCAGCGTTGACTCCTTCTGGATGTTGTAGTCCGAA 47629
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGG 34281
|| || |||| |||| ||||||||| || || || |||||||||||||| | ||||
Sbjct 47630 AGTGTGCGTCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCTGGCGGG 47689
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || ||||||||| ||||| ||| | || | | |||| ||| | || || ||
Sbjct 47690 -ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATCGTATCCGAGGACTCCAC 47748
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||| || || || || || | || || || |||||||||||
Sbjct 47749 CTCAAGCGTAATCGTCTTTCCTGTCAACGTCTTGACGAAGATCTGCAT 47796
>seq124
Length=325275
Score = 125 bits (138), Expect = 5e-24
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | ||||||||||| | || || ||||| ||||||||||| |||
Sbjct 289398 CCACCACGCAGGCGGAGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAC 289457
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| || | ||||||||| || ||||| || |||||||||||| ||
Sbjct 289458 AGGGTCCGGCCGTCCTCGAGCTGCTTGCCAGCAAAAATCAGGCGCTGCTGGTCGGGCGGG 289517
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | || | | |||| || | || |||||
Sbjct 289518 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACC 289577
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAG 34381
|||| |||||||| ||||| || || || ||||| |||
Sbjct 289578 TCCAAGGTGATGGTCTTGCCCGTAAGGGTCTTCACGAAG 289616
>seq64
Length=19946
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| || |||| ||||||||||| | || || || || || ||||||||||| ||
Sbjct 14253 CCGCCACGGAGCCGAAGCACCAGGTGGAGCGTGCTCTCCTTTTGGATGTTGTAGTCAGAG 14312
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || | || |||| |||||| || |||||||| || ||||||||||| |||
Sbjct 14313 AGAGTCCGACCATCCTCCAGCTGCTTTCCCGCGAAAATCAGGCGCTGCTGGTCAGGGGGG 14372
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||| ||||| ||||| ||| | || | | || | ||| | |||||
Sbjct 14373 ATGCCCTCTTTGTCCTGAATCTTGGACTTGACATTGTCGATTGTGTCGCTGCTCTCGACC 14432
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCT 34393
|| | |||||||| ||||| || || || ||||| ||||||||||| |||
Sbjct 14433 TCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATGGCT 14483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323070381712160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |