Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq322 120 7e-22 seq124 91.5 3e-13 seq43 86.0 1e-11 >seq322 Length=205014 Score = 120 bits (132), Expect = 7e-22 Identities = 269/399 (67%), Gaps = 24/399 (6%) Strand=Plus/Minus Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070 |||| || |||| || || || || ||||||||||| || ||||||||||||||| Sbjct 189358 TGCTCTTTTACGGCCCGCCGGGCACGGGCAAGACGTCGACGATCCTGGCGCTGGCCAAGG 189299 Query 254071 CCCTGTT-GGGCGAGGGGAACATGAGAGAGCGCG--TGCTCGAGCTGAACGCTTCTGACG 254127 |||| |||| |||| || | || | |||| ||||||||||| || |||| Sbjct 189298 AGCTGTACGGGCC---GGAATTTGTCAAGTCGAGAGTGCTGGAGCTGAACGCGTCGGACG 189242 Query 254128 AACGCGGGTTGGACGTCGTCCGCGACAAGATCAAG-ACTTTCTCCA-----AGATGTCGA 254181 | ||||| | | || || || ||| ||||| ||||| || || || ||| Sbjct 189241 AGCGCGGCATCTCGATTGTGCGGGAAAAGGTCAAGGACTTTGCCCGGATGCAGCTGACGA 189182 Query 254182 TTTCGTCG------TTCCA-ACCCGGC-----TGTCCGCCTTTCAAGCTCGTGATCCTGG 254229 || || | || | |||| || ||||| |||||||| | | |||| Sbjct 189181 ACCCGCCGCCGGGCTACCGCAACCGGTACCCGTGCCCGCCCTTCAAGCTGATCGTGCTGG 189122 Query 254230 ACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGC 254289 ||||||| ||| | ||||| ||||| ||| ||| || ||||| |||||||||||| Sbjct 189121 ACGAGGCCGACTCGATGACACAAGACGCACAGAGCGCGCTGCGCCGGACGATGGAGACGT 189062 Query 254290 ACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCCCCGC 254349 || | | || || || || || | |||||||||||| || ||||||| ||||| Sbjct 189061 ACAGCAAGATCACTCGGTTCTGTCTCATCTGCAACTACGTGACGCGCATCATCGACCCGC 189002 Query 254350 TGGCTTCTCGGTGCGCCAAGTTTCGATTCAGCACCCTCG 254388 |||| || ||| ||||||||| |||| | ||||| Sbjct 189001 TGGCCAGCCGCTGCAGCAAGTTTCGCTTCAAGAGCCTCG 188963 >seq124 Length=325275 Score = 91.5 bits (100), Expect = 3e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 115417 TGAATCGGTTCGATGATTTTGGTGGAGTTGTTGCAGACTATGATGAACCGCGTCGTGCTC 115476 |||| ||| |||||||| ||| |||| | ||||||| | | |||||| |||||| | Sbjct 164951 TGAAGCGGCTCGATGATCTTGTTGGACTGGTTGCAGGCAAACGCGAACCGGGTCGTGTTG 164892 Query 115477 GAGTAAACATCCATGATCCGTCGCAGCGCCTGGAAAGCACCAGGTGTCATCGAGTCTGCC 115536 ||||| | ||||| |||| ||||||||||| || || | ||||| ||| ||| Sbjct 164891 GAGTAGATCTCCATCGTCCGCCGCAGCGCCTGCTGCGCCCCCGACGTCATGCTGTCGGCC 164832 Query 115537 TCGTCGAGAACGACAATCTT 115556 ||||| || | ||||||||| Sbjct 164831 TCGTCCAGGATGACAATCTT 164812 >seq43 Length=28586 Score = 86.0 bits (94), Expect = 1e-11 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060 || || ||| |||| | | || || || || || ||||||||||| || ||||||||| Sbjct 1449 CTGCCACATCTGCTGCTGTATGGACCGCCGGGCACGGGCAAGACGTCGACGATCCTGGCG 1508 Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCT 254120 ||||| || | | | || | | |||| | | || ||||| ||||| ||||| Sbjct 1509 CTGGCGCGGCGCATCTATGGGGCCGACAACACGCGGCAGATGGTGCTGGAGCTCAACGCG 1568 Query 254121 TCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTT 254167 || ||||| ||||| | ||||| || ||||| |||||||||| || Sbjct 1569 TCCGACGACCGCGGCATCGACGTGGTGCGCGAGCAGATCAAGACGTT 1615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073760745613248