Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq365 136 3e-27
seq64 127 2e-24
>seq365
Length=144107
Score = 136 bits (150), Expect = 3e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||||||||| |||||||||||||||||||| ||| ||| | || |||
Sbjct 47816 ACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGCCCATCCTCC 47875
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
||||| || || || || |||| ||||| ||||| || || | ||||||||||||
Sbjct 47876 AGTTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCTGGCGGGATACCCTCCTTGTCTTGG 47935
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| ||| ||| || | | |||| ||||||||||| ||||||||||||
Sbjct 47936 ATCTTTGACTTCACATTGTCAATCGTGTCTGACGACTCCACCTCCAACGTAATCGTCTTG 47995
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
||||| || |||||||||||||| ||||||
Sbjct 47996 CCCGTGAGCGTCTTCACAAAGATCTGCATG 48025
Score = 109 bits (120), Expect = 4e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||||||||| ||||||||| ||||||||||| ||| ||| |||| |||
Sbjct 47588 ACCAGGTGCAGCGTTGACTCCTTCTGGATGTTGTAGTCCGAAAGTGTGCGTCCGTCCTCC 47647
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || || || |||| |||||| ||||| || || | ||||||||||||
Sbjct 47648 AGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGG 47707
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | ||| ||||||||| | |||||||||||
Sbjct 47708 ATCTTCGACTTGACATTGTCAATCGTATCCGAGGACTCCACCTCAAGCGTAATCGTCTTT 47767
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| |||| ||||| || ||||| ||||||
Sbjct 47768 CCTGTCAACGTCTTGACGAAGATCTGCATG 47797
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||||| |||||||||||||||||||||| || || | || ||
Sbjct 48044 ACCAGATGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGCGTCCGCCCATCCTCA 48103
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || ||||| || | ||||| || ||||| || | ||||| |||||| |
Sbjct 48104 AGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCTTTGTCCTGA 48163
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | ||||| ||| ||||| | || |||||||||
Sbjct 48164 ATCTTGCTCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCAAGAGTGATCGTCTTG 48223
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||||||||||||| |||||||| |||||
Sbjct 48224 CCCGTCAGAGTCTTGACAAAGATCTGCAT 48252
>seq64
Length=19946
Score = 127 bits (140), Expect = 2e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| |||||||||||||| || ||||||||||| || ||| | || |||
Sbjct 14271 ACCAGGTGGAGCGTGCTCTCCTTTTGGATGTTGTAGTCAGAGAGAGTCCGACCATCCTCC 14330
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || ||||| ||||| |||| ||||| ||||| || || | ||||| |||||| |
Sbjct 14331 AGCTGCTTTCCCGCGAAAATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTGA 14390
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | |||| | | ||| ||||| | ||| || ||||||
Sbjct 14391 ATCTTGGACTTGACATTGTCGATTGTGTCGCTGCTCTCGACCTCAAGGGTGATGGTCTTG 14450
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|||||||| |||||||| ||||| ||||||
Sbjct 14451 CCCGTCAGGGTCTTCACGAAGATCTGCATG 14480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395073221043631
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |