Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq401 439 2e-118
seq365 107 2e-18
seq222 104 2e-17
seq124 100 3e-16
seq64 82.4 7e-11
>seq401
Length=585928
Score = 439 bits (486), Expect = 2e-118
Identities = 1243/1895 (66%), Gaps = 39/1895 (2%)
Strand=Plus/Plus
Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164
|| ||| || || ||||| |||| | ||||| | | ||||| || || ||||| ||
Sbjct 360151 CTGGTCAACAGTGAACTGGATGGGCTGGGCGGCGGCCTGCGTGCGCAGGTAGTACATTCC 360210
Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224
|||||| ||||||| |||||| || || || || ||| | || || | ||
Sbjct 360211 CGTCTTGAGACCCAGCTTCCAGCCGGCGAAGTGCATGCTCGTGATCTTGCCCATGGTGGG 360270
Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284
| | ||||| | || | |||||| ||| |||||||| || || || ||||||||
Sbjct 360271 CTCGCGCATGTGGATGTTCAGCGACTGCGACTGGTCGATAAATGCGCCCCGGTCGGCGGC 360330
Query 22285 CATATTTATCAAT-GTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343
||| | | |||| || ||| || || ||||| ||||||||||| || | |||| |
Sbjct 360331 CATCTGCA-CAATCGTGCGCTGGGAGATCTCCCACACGGTCTTGTAGAGAGCCTTGATGT 360389
Query 22344 CTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAA 22403
| ||| || ||| |||||| || ||| | | ||||| || || |
Sbjct 360390 CGGCCGGGATGTTGGGGATGTTCTGGATCGAACCGCCCTCGGCAATGATGCGGTTCTTCA 360449
Query 22404 TCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTT 22463
| | || ||||| ||| ||| | | ||| || | ||| |||| ||||| |
Sbjct 360450 TGTTGTCCGACCACAGACCCATGTCAACGAGATCCTTCAGCAGCCACGGGTTGACCACCT 360509
Query 22464 GAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATT 22523
| |||||||| | || || ||||| ||| |||||||| ||| |||| ||||| | |
Sbjct 360510 GGAACTCGCCCGCCAGCACACGGCGCGAGTAGATGTTGGACGTGTACGGCTCGAAGCACT 360569
Query 22524 CATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGT 22583
| ||||| ||||| ||||| | ||||| || |||||||| || |||| ||| || ||
Sbjct 360570 CGTTGTTGCCCAGAATCTGCGACGTCGACGCTGTCGGCATGGGGGCCACCAGCAGACTGT 360629
Query 22584 TTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAG---CATCGA---CCAGTCCCACAGAT 22637
| | || |||||||| ||| |||| || || ||| |||||||||||| |
Sbjct 360630 TGCGCACGCCGTGCTCC------TTAATCTTCAGACGCAGCGAGTCCCAGTCCCACAGGT 360683
Query 22638 CGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGC 22697
| |||||| |||| ||||||||| ||| ||||| | ||| || | | || ||
Sbjct 360684 CAGACGGCTTCAC---GTCCCACATGTCGGGTTGCAGAATGCCCTGAGACACGGGAGAGC 360740
Query 22698 CTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGC 22757
| |||||||| ||| | || | ||| ||| || ||||| |||| || |||
Sbjct 360741 CCTCGTACGTCGAGTAGGTGCCCTCGATCTTGGCCAGATCGCACGACGCCGTCAGAGCGG 360800
Query 22758 CGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGACGCTTTCG 22813
||| || || ||||| ||||||| |||||| | || ||| |||||| |||
Sbjct 360801 CGTGGTAAATGGTCTCAAAGATTTGCTTGTTGAGCTCACGGGCCTCGGGCGAC----TCG 360856
Query 22814 TACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGT 22873
| ||||| |||| || ||| || ||||||| ||||| || || | |||||| ||
Sbjct 360857 AAGGGCATGCGCAGAGCCAAGAAGGCATCCGCCAGTCCCTGCACACCCAGACCGATAGGC 360916
Query 22874 CGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTT 22933
|| | || || || ||||| |||| ||| || | || || ||
Sbjct 360917 CGATGGCGCATGTTGCTGTTCTTGGCCTCCGGCACAGGGTAGTAGTTGACGTCAATGACG 360976
Query 22934 CTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACG 22993
||||| ||| | | || | | | | | ||||||||
Sbjct 360977 TGGTTCAGGTTGCGGACGACCAGCTGTGCAACCTCGTGAAGCTTCTTGAAGTCGTATGT- 361035
Query 22994 CCCGAT--TGTA--CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCAC 23049
| || | |||| |||| || | ||| | ||||| | ||||| || |||||
Sbjct 361036 CTCGTTGGTGTAGTCAACGAAAGACGGCAGGGCCAGAGAGGCCAAGTTGCAAACAGCCAC 361095
Query 23050 CTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCC 23109
||| ||| || | |||||| || || || || || || ||| | || |||||
Sbjct 361096 CTCATCTGGGGCAGAGTACTCCACGATCTCCGTGCACAGGTTGGAGCTGCGGATGGTGCC 361155
Query 23110 CAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCC 23169
|| || |||||||||| || || ||||| ||||||||||||||| |||| ||||
Sbjct 361156 CAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAACGGGTTGCC 361215
Query 23170 CGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCAC 23229
|||||| ||| | |||| || || ||| | |||| || | | |||| ||
Sbjct 361216 CGTCTCCGTCTGGGCTTCGAGAATGGCGTACCAGAGCTTCTGGGCCTTGAT-CGTCTTAC 361274
Query 23230 GTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGT 23288
| | | ||||| ||| ||||| | ||||| || ||||| ||| | || || ||||
Sbjct 361275 GACCGCGACCTTCGCGCTCATACTTCTCGTACAGGGCCTCAAACTCGTCGCCATAGCAGT 361334
Query 23289 CGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTG--AGTCATTTTCAAC 23346
| |||| |||||| | | | || ||||| || |||| || | | || || || ||
Sbjct 361335 CCGCCATGCCGGGGCACTCGTTGGGGCACATCAGTGTCCA-ATCGCCATTC-TTCTCCAC 361392
Query 23347 GCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTC 23406
|| |||| || ||||| || ||||| || ||| |||||| |||||||| || | |||
Sbjct 361393 ACGCTTCATGAACAGATCAGGGATCCAGAGGGCGAGGAACAGATCGCGGGCACGGATCTC 361452
Query 23407 CTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTC 23466
||| ||||| |||||| || ||| | ||| || || || || || ||||| |||||
Sbjct 361453 CTCCTTGCCATGGTTCTTGCGCAGATCGAGAAACTCAAAGACATCGGCGTGCCAAGGCTC 361512
Query 23467 GAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGT 23526
||||| | | || || || || | ||| || |||||||| || || || || |||||
Sbjct 361513 AAGGTATATGCAGAAAGCACCGGGGCGCTTGTTTCCGCCCTGGTCCACATAGCGTGCCGT 361572
Query 23527 GTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCAC 23586
||||||||| || | ||||| || | || |||||||| | |||| | ||| || |
Sbjct 361573 GTTGTTGTAGACACGGAGCATAGGGATGATGCCGTTGGATGTGCCGTTTGTGCCGGCAAT 361632
Query 23587 ACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGA 23646
|| || | || || | | ||| || | || || || || ||| ||| || ||
Sbjct 361633 GTAGGAGCCAGTAGCCCGGATGCGGTGGACATTGAGGCCAATTCCACCGGCCGTCTTGGA 361692
Query 23647 TATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGC 23706
||||| || || || || ||||||||||| |||||||||||||| || || | |
Sbjct 361693 GATCATGGCACAGGTCTTGAGGGTGTCGTAGATACCCTCGATGCTGTCATCCTTCATGTC 361752
Query 23707 GACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCT 23766
|| | ||| || || ||||| || || | || || |||| ||| || || ||
Sbjct 361753 CACGAGGAAGCAGGAGGACATCTGGGCCTGTGGGGTGCCGGCGTTGAAGAGCGTGGGCGA 361812
Query 23767 GGCGTGCGTAAAGTATCCATTCGACAT-TAGATTGTACGTGTCGATGGCGGCATCAATGT 23825
||| ||||| ||| | |||||||| ||| ||||| || |||| | || | ||
Sbjct 361813 GGCATGCGTGAAGAACTTGTTCGACATGTAG-TTGTATGTCTCGACAACACGCTCCACGT 361871
Query 23826 CCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGA 23885
|| || || || | | |||||||| ||||||| || || | ||||| |
Sbjct 361872 TGTCACCCCAGATGCCCACTGACACGCGCATGATCATGTGCTGTGGCCGTTCGACAATCT 361931
Query 23886 CGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGT 23945
|||||| | |||| ||| || || || | || || || || ||||| || | || |
Sbjct 361932 TGCCGTTCAGCTTGAGCAGGTAGGACCGCTCCAGGGTCTTGAAGCCAAAGTATTGGTAAT 361991
Query 23946 TAAAGTCACGATCGTGCACTATGGCCGAATTCAAA 23980
| |||||||| || | || ||||| ||| |||||
Sbjct 361992 TGAAGTCACGGTCATAAACAATGGCTGAA-TCAAA 362025
>seq365
Length=144107
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || ||||||||||| ||||| |||||||| | || || || ||||
Sbjct 48252 ATGCAGATCTTTGTCAAGACTCTGACGGGCAAGACGATCACTCTTGAGGTCGAGTCGTCG 48193
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || |||||| || ||| | || ||||| |||
Sbjct 48192 GACACGATCGACAACGTCAAGAGCAAGATTCAGGACAAAGAGGGCATTCCCCCCGATCAG 48133
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || ||||||||||| ||| | || || ||| | ||| || |||
Sbjct 48132 CAGCGTCTCATTTTCGCTGGCAAGCAGCTTGAGGATGGGCGGACGCTTTCCGACTACAAC 48073
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || || || || || |||||||| ||
Sbjct 48072 ATTCAGAAGGAGTCTACGCTGCATCTGGTGCT 48041
Score = 100 bits (110), Expect = 3e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || || || || || || || ||||| || ||||| | || |||||| ||||
Sbjct 48481 CATGCAGATCTTTGTCAAAACGCTTACCGGCAAGACCATCACACTAGAGGTTGAATCGTC 48422
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | ||||| | || |||||| || ||| | || ||||| ||
Sbjct 48421 GGACACGATAGACAACGTCAAGAGCAAGATTCAGGACAAAGAGGGCATTCCCCCCGATCA 48362
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||||| || || ||||||||||| ||| | || ||| | ||| | |||||| ||
Sbjct 48361 GCAGCGCCTCATTTTCGCTGGCAAGCAGCTCGAGGACGGTCGGACGCTATCCGATTACAA 48302
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||| || || || ||||| || || || || || | ||| | || ||||
Sbjct 48301 CATCCAGAAGGAGTCGACGCTCCACCTCGTCCTGCGTCTGCGTGGTGGTA 48252
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||| ||||||| || ||||| || | || || || | ||
Sbjct 47797 CATGCAGATCTTCGTCAAGACGTTGACAGGAAAGACGATTACGCTTGAGGTGGAGTCCTC 47738
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|| | | || | ||||| || || ||||||||| ||| | ||||| |||||
Sbjct 47737 GGATACGATTGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCGCCAGACCA 47678
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||||| || || || |||||||| ||| |||| ||| || | || || ||
Sbjct 47677 GCAGCGGCTGATCTTTGCTGGCAAGCAGCTGGAGGACGGACGCACACTTTCGGACTACAA 47618
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
||| || || || || || || || ||||| || | ||| | |||||
Sbjct 47617 CATCCAGAAGGAGTCAACGCTGCACCTGGTGCTGCGTCTGCGTGGCGG 47570
>seq222
Length=676535
Score = 104 bits (114), Expect = 2e-17
Identities = 225/332 (68%), Gaps = 10/332 (3%)
Strand=Plus/Plus
Query 57963 TTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTT-CGGGCAGCTT 58021
|||||| || | | |||| ||||||||||| || ||||| ||||| |||| ||||
Sbjct 131666 TTCGCCCAGCGCTTGGTCGCTTTCGCCGCCGTTGAGGGTATTTTCTTCAGCGGG--GCTT 131723
Query 58022 TG-CGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACG 58080
| | | || || ||| ||||||| || ||||||||||| |||||||| || ||||
Sbjct 131724 TCTCCTCCATCTTCTGGTTGAAGAAGCGTGGCCTGATGCCTGGCCTGACATTCTCGAACG 131783
Query 58081 AGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACA 58140
|| | || || || |||||||| || || || || ||||| ||||| | | ||| ||
Sbjct 131784 AGCTTATTTCTCGTGACGAGGGCCTGCACACCGACTTTGCCTGCCTGCTCTTCTCGCA-- 131841
Query 58141 TTGTCAATAA---ACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGA 58197
| |||| || |||| | | | ||| ||| || || ||| || ||| ||
Sbjct 131842 -TCTCAAGAACCGCCCGAGCAAGCAGCTGATCGAGGATATCATTGTCGATGCTGTCAAGA 131900
Query 58198 TCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATT 58257
| || | ||||| | ||||| || || || || | ||||| ||||||
Sbjct 131901 TTGAGCAGGAGTTCCTGACCGAGGCGCTTCCCTGCGCTCTTCTCGGCATGAACTCCACCC 131960
Query 58258 TGATGTCAAAGTACATTGAGTTTGTTGCCGAC 58289
| ||| | ||||||||||| |||||||||
Sbjct 131961 TCATGAAGCAATACATTGAGTTCGTTGCCGAC 131992
>seq124
Length=325275
Score = 100 bits (110), Expect = 3e-16
Identities = 154/220 (70%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261
||||| ||||| || || ||||| || |||||| | || || || | || |||| ||
Sbjct 289615 TTCGTGAAGACCCTTACGGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 289556
Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321
|| | ||||| | || ||||||||| ||| | ||||||||||||||||| ||
Sbjct 289555 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAGCAGCGCCTG 289496
Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381
|| || |||||||| ||| | || ||| ||| || || || ||||| || ||
Sbjct 289495 ATTTTTGCTGGCAAGCAGCTCGAGGACGGCCGGACCCTGTCGGACTACAACATCCAGAAG 289436
Query 31382 GAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| ||||| || || ||||| || | ||| | || ||||
Sbjct 289435 GAGTCGACCCTGCACCTGGTGCTCCGCCTGCGTGGTGGTA 289396
>seq64
Length=19946
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||| ||||| ||||| || |||||| | || || ||
Sbjct 14480 CATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGAGCAG 14421
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||||| |||| | ||||| | || |||||| || ||| | || || |||||
Sbjct 14420 CGACACAATCGACAATGTCAAGTCCAAGATTCAGGACAAAGAGGGCATCCCCCCTGACCA 14361
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||||| || || ||||| || || ||| |||| || | |||| | || || ||
Sbjct 14360 GCAGCGCCTGATTTTCGCGGGAAAGCAGCTGGAGGATGGTCGGACTCTCTCTGACTACAA 14301
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
||| ||||| || || || || ||||| ||| | || | |||||
Sbjct 14300 CATCCAAAAGGAGAGCACGCTCCACCTGGTGCTTCGGCTCCGTGGCGG 14253
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445764109875120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |