Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq365 113 4e-20 >seq365 Length=144107 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 |||||||| || | ||||| || | ||| | ||| ||||| || || ||||| || || Sbjct 47567 TGGCCGCCACGCAGACGCAGCACCAGGTGCAGCGTTGACTCCTTCTGGATGTTGTAGTCC 47626 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 | ||||| ||| || ||||| || |||||| ||||||| || ||||| || || Sbjct 47627 GAAAGTGTGCGTCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCTGGC 47686 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 || ||||| || ||||| ||| || || | | || | || || | || |||| Sbjct 47687 GGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATCGTATCCGAGGACTCC 47746 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||||| || | |||||| || |||||||| || ||||| || ||||| Sbjct 47747 ACCTCAAGCGTAATCGTCTTTCCTGTCAACGTCTTGACGAAGATCTGCAT 47796 Score = 93.3 bits (102), Expect = 4e-14 Identities = 142/200 (71%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 139567 CGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACC 139626 ||||||||| || |||||||| || ||| | || | | || || ||||| || || Sbjct 48055 CGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGCGTCCGCCCATCCTCAAGCTGCTTGCC 48114 Query 139627 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGT-T 139685 ||| | || ||||| ||||||||||| || ||||| |||||||| ||| | || | | Sbjct 48115 AGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCTTTGTC-CTGAATCTTGCTCT 48173 Query 139686 TTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACG 139745 | | | || | ||||| | | ||| ||||||| || | ||||||||| |||| | Sbjct 48174 TGACGTTGTCGATCGTGTCCGACGACTCGACCTCAAGAGTGATCGTCTTGCCCGTCAGAG 48233 Query 139746 TTTTTACGAATATTTGCATA 139765 | || || || || |||||| Sbjct 48234 TCTTGACAAAGATCTGCATA 48253 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||||| || | ||| | ||| ||||| || || ||||| |||||| Sbjct 48254 CCACCACGCAGACGCAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGG-- 48311 Query 139598 ATTGTGCTCGA--GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 || | | ||| ||| |||||||| || ||||| | || || || ||||||||||| | Sbjct 48312 ATAGCGTCCGACCGTCCTCGAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGATCGGGGG 48371 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGT-TTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 | ||||| |||||||| ||| | || | || | | || | ||||| | | || Sbjct 48372 GAATGCCCTCTTTGTC-CTGAATCTTGCTCTTGACGTTGTCTATCGTGTCCGACGATTCA 48430 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| | || | ||||||||||| | |||||| || || || ||||| Sbjct 48431 ACCTCTAGTGTGATGGTCTTGCCGGTAAGCGTTTTGACAAAGATCTGCAT 48480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496061451471200