Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq365 89.7 5e-13 >seq365 Length=144107 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| || || | ||| | || | ||| | ||||| || || || |||||||| ||| Sbjct 48025 GCCACCACGGAGACGGAGCACCAGATGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGGA 48084 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || | | || || || || || ||||| | || ||||| ||||||||||| || Sbjct 48085 AAGCGTCCGCCCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGG 48144 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 ||||| |||||||| ||| || || | | || | |||||||| | || || Sbjct 48145 AATGCCCTCTTTGTCCTGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGACGACTCGAC 48204 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 |||| ||| | ||||||||| |||| || || || || || |||||| Sbjct 48205 CTCAAGAGTGATCGTCTTGCCCGTCAGAGTCTTGACAAAGATCTGCATA 48253 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGA--GTCTTCGAGTTGTTTAC 143045 || || || || || |||||||||||| || | | ||| ||| ||||| || || | Sbjct 48284 GTCGACTCCTTCTGGATGTTGTAATCG--GATAGCGTCCGACCGTCCTCGAGCTGCTTGC 48341 Query 143046 CAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTT 143105 |||| | || || || ||||||||||| || ||||| |||||||| ||| || | Sbjct 48342 CAGCGAAAATGAGGCGCTGCTGATCGGGGGGAATGCCCTCTTTGTCCTGAATCTTGCTCT 48401 Query 143106 TTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATG 143165 | | | || | |||||||| | ||| || || | || | ||||||||||| | | Sbjct 48402 TGACGTTGTCTATCGTGTCCGACGATTCAACCTCTAGTGTGATGGTCTTGCCGGTAAGCG 48461 Query 143166 TTTTTACGAATATTTGCAT 143184 |||| || || || ||||| Sbjct 48462 TTTTGACAAAGATCTGCAT 48480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507011795213520