Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq401 192 9e-44 seq222 125 1e-23 >seq401 Length=585928 Score = 192 bits (212), Expect = 9e-44 Identities = 371/542 (68%), Gaps = 4/542 (1%) Strand=Plus/Minus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866 |||||||||| ||| ||| | | || |||||| | | ||||| | | |||| Sbjct 361623 ACAAACGGCACATCCAACGGCATCATCCCTATGCTCCGTGTCTACAACAACACGGCACGC 361564 Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926 || || |||||||| || || || || || ||| | | | ||| | || |||||| Sbjct 361563 TATGTGGACCAGGGCGGAAACAAGCGCCCCGGTGCTTTCTGCATATACCTTGAGCCTTGG 361504 Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986 ||||| || || ||||| ||| |||| ||||||| ||| |||| || ||| || Sbjct 361503 CACGCCGATGTCTTTGAGTTTCTCGATCTGCGCAAGAACCATGGCAAGGAGGAGATCCGT 361444 Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046 ||| | || |||| || |||||| | || ||| ||||||||||||| || | | Sbjct 361443 GCCCGCGATCTGTTCCTCGCCCTCTGGATCCCTGATCTGTTCATGAAGCGTGTGGAGAAG 361384 Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106 |||| | |||| || ||||||||| || || ||||| || | || |||| ||| Sbjct 361383 AATGGCGATTGGACACTGATGTGCCCCAACGAGTGCCCCGGCATGGCGGACTGCTATGGC 361324 Query 97107 GAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGT 97165 || |||||||||||| |||| | || |||| || || || ||| |||||| | Sbjct 361323 GACGAGTTTGAGGCCCTGTACGAGAAGTATGAGCGCGAAGGTCGCGGTCGTAAGACGA-T 361265 Query 97166 CGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224 | | || | |||| || ||| | ||||| | || ||| ||||| || | |||| Sbjct 361264 CAAGGC-CCAGAAGCTCTGGTACGCCATTCTCGAAGCCCAGACGGAGACGGGCAACCCGT 361206 Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCA 97284 ||| ||||||||||| | || ||||| |||||||| || ||||||||||| Sbjct 361205 TCATGCTCTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATCC 361146 Query 97285 AGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTT 97344 ||||||| ||||||||||| || || |||||| | | || || ||| ||| |||| Sbjct 361145 GCAGCTCCAACCTGTGCACGGAGATCGTGGAGTACTCTGCCCCAGATGAGGTGGCTGTTT 361086 Query 97345 GC 97346 || Sbjct 361085 GC 361084 >seq222 Length=676535 Score = 125 bits (138), Expect = 1e-23 Identities = 308/457 (67%), Gaps = 25/457 (5%) Strand=Plus/Plus Query 125407 AGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGG 125466 |||| || | |||| | | |||| || ||||||||||| ||||| || ||||| | Sbjct 131658 AGTCCTCCTTCGCCCAGCGCTTGGTCGCTTTCGCCGCCGTTGAGGGTATTTTCTTCAGCG 131717 Query 125467 GTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACA 125526 | ||| | ||||||| ||| | |||||||| || || ||||| || ||||| | Sbjct 131718 GGGCTTTCTCCTCCATCTTCTGGTTGAAGAAGCGTGGCCTGATGCCTGGCCTGACATTCT 131777 Query 125527 GTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-T 125585 |||||| |||| ||||| ||||||||||| ||| ||||||||| || || || | Sbjct 131778 CGAACGAGCTTATTTCTCGTGACGAGGGCCTGCACACCGACTTTGCCTGCCTGCTCTTCT 131837 Query 125586 CGCAACT-ATCTGCGTCCCGAGTGCAGATCCAGC-GATGAAAAGGTCATCAACATTGTAA 125643 |||| || | | |||||| | |||| ||| ||| || | |||||| Sbjct 131838 CGCATCTCAAGAACCGCCCGAG----CAAGCAGCTGAT--CGAGG--AT-ATCATTGT-- 131886 Query 125644 CCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTG 125703 |||||| || | ||| || || ||||| || ||||| | || || | | | | Sbjct 131887 -CGATGCTGTCAAGATTGAGCAGGAGTTCCTGACCGAGGCGCTTCCCTGCGCTCTTCTCG 131945 Query 125704 GCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACG 125763 ||||||||| || || ||| | ||||| ||||| || || || || |||||| Sbjct 131946 GCATGAACTCCACCCTCATGAAGCAATACATTGAGTTCGTTGCCGACCGCCTACTG---- 132001 Query 125764 AGTTG--ATTGGC---CGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAG 125818 |||| ||||| |||| | ||| | ||| || ||||| || |||||| | Sbjct 132002 -GTTGCTCTTGGCAATGACAAGGTGTACCGCTCCACCAACCCCTTCGACTTCATGGAGAA 132060 Query 125819 CATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAG 125855 ||| || || | || ||||||||||| ||||||||| Sbjct 132061 CATCTCCCTGGGTGGCAAGACCAACTTCTTCGAGAAG 132097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741055392808360