Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq401 192 9e-44
seq222 125 1e-23
>seq401
Length=585928
Score = 192 bits (212), Expect = 9e-44
Identities = 371/542 (68%), Gaps = 4/542 (1%)
Strand=Plus/Minus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866
|||||||||| ||| ||| | | || |||||| | | ||||| | | ||||
Sbjct 361623 ACAAACGGCACATCCAACGGCATCATCCCTATGCTCCGTGTCTACAACAACACGGCACGC 361564
Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926
|| || |||||||| || || || || || ||| | | | ||| | || ||||||
Sbjct 361563 TATGTGGACCAGGGCGGAAACAAGCGCCCCGGTGCTTTCTGCATATACCTTGAGCCTTGG 361504
Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986
||||| || || ||||| ||| |||| ||||||| ||| |||| || ||| ||
Sbjct 361503 CACGCCGATGTCTTTGAGTTTCTCGATCTGCGCAAGAACCATGGCAAGGAGGAGATCCGT 361444
Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046
||| | || |||| || |||||| | || ||| ||||||||||||| || | |
Sbjct 361443 GCCCGCGATCTGTTCCTCGCCCTCTGGATCCCTGATCTGTTCATGAAGCGTGTGGAGAAG 361384
Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106
|||| | |||| || ||||||||| || || ||||| || | || |||| |||
Sbjct 361383 AATGGCGATTGGACACTGATGTGCCCCAACGAGTGCCCCGGCATGGCGGACTGCTATGGC 361324
Query 97107 GAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGT 97165
|| |||||||||||| |||| | || |||| || || || ||| |||||| |
Sbjct 361323 GACGAGTTTGAGGCCCTGTACGAGAAGTATGAGCGCGAAGGTCGCGGTCGTAAGACGA-T 361265
Query 97166 CGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224
| | || | |||| || ||| | ||||| | || ||| ||||| || | ||||
Sbjct 361264 CAAGGC-CCAGAAGCTCTGGTACGCCATTCTCGAAGCCCAGACGGAGACGGGCAACCCGT 361206
Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCA 97284
||| ||||||||||| | || ||||| |||||||| || |||||||||||
Sbjct 361205 TCATGCTCTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATCC 361146
Query 97285 AGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTT 97344
||||||| ||||||||||| || || |||||| | | || || ||| ||| ||||
Sbjct 361145 GCAGCTCCAACCTGTGCACGGAGATCGTGGAGTACTCTGCCCCAGATGAGGTGGCTGTTT 361086
Query 97345 GC 97346
||
Sbjct 361085 GC 361084
>seq222
Length=676535
Score = 125 bits (138), Expect = 1e-23
Identities = 308/457 (67%), Gaps = 25/457 (5%)
Strand=Plus/Plus
Query 125407 AGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGG 125466
|||| || | |||| | | |||| || ||||||||||| ||||| || ||||| |
Sbjct 131658 AGTCCTCCTTCGCCCAGCGCTTGGTCGCTTTCGCCGCCGTTGAGGGTATTTTCTTCAGCG 131717
Query 125467 GTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACA 125526
| ||| | ||||||| ||| | |||||||| || || ||||| || ||||| |
Sbjct 131718 GGGCTTTCTCCTCCATCTTCTGGTTGAAGAAGCGTGGCCTGATGCCTGGCCTGACATTCT 131777
Query 125527 GTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-T 125585
|||||| |||| ||||| ||||||||||| ||| ||||||||| || || || |
Sbjct 131778 CGAACGAGCTTATTTCTCGTGACGAGGGCCTGCACACCGACTTTGCCTGCCTGCTCTTCT 131837
Query 125586 CGCAACT-ATCTGCGTCCCGAGTGCAGATCCAGC-GATGAAAAGGTCATCAACATTGTAA 125643
|||| || | | |||||| | |||| ||| ||| || | ||||||
Sbjct 131838 CGCATCTCAAGAACCGCCCGAG----CAAGCAGCTGAT--CGAGG--AT-ATCATTGT-- 131886
Query 125644 CCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTG 125703
|||||| || | ||| || || ||||| || ||||| | || || | | | |
Sbjct 131887 -CGATGCTGTCAAGATTGAGCAGGAGTTCCTGACCGAGGCGCTTCCCTGCGCTCTTCTCG 131945
Query 125704 GCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACG 125763
||||||||| || || ||| | ||||| ||||| || || || || ||||||
Sbjct 131946 GCATGAACTCCACCCTCATGAAGCAATACATTGAGTTCGTTGCCGACCGCCTACTG---- 132001
Query 125764 AGTTG--ATTGGC---CGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAG 125818
|||| ||||| |||| | ||| | ||| || ||||| || |||||| |
Sbjct 132002 -GTTGCTCTTGGCAATGACAAGGTGTACCGCTCCACCAACCCCTTCGACTTCATGGAGAA 132060
Query 125819 CATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAG 125855
||| || || | || ||||||||||| |||||||||
Sbjct 132061 CATCTCCCTGGGTGGCAAGACCAACTTCTTCGAGAAG 132097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741055392808360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |