Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq365 134 3e-26 seq64 114 3e-20 seq124 86.0 1e-11 >seq365 Length=144107 Score = 134 bits (148), Expect = 3e-26 Identities = 150/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || || || ||||| || | |||||| || || || || ||| Sbjct 48284 GTCGACTCCTTCTGGATGTTGTAATCGGATAGCGTCCGACCGTCCTCGAGCTGCTTGCCA 48343 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481 || ||||| || | ||| ||||| || || || || ||||| ||||||||| ||||| || Sbjct 48344 GCGAAAATGAGGCGCTGCTGATCGGGGGGAATGCCCTCTTTGTCCTGAATC-TTGCTCTT 48402 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || |||| || || | ||| ||||||||||| || ||||| || ||||| || Sbjct 48403 GACGTTGTCTATCGTGTCCGACGATTCAACCTCTAGTGTGATGGTCTTGCCGGTAAGCGT 48462 Query 104542 TTTTACAAATATCTGCAT 104559 ||| ||||| |||||||| Sbjct 48463 TTTGACAAAGATCTGCAT 48480 Score = 111 bits (122), Expect = 4e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | ||||| || |||||||| || ||||| || || || | || || Sbjct 48041 AGCACCAGATGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGCGTCCGCCCATCC 48100 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || ||||| ||||| || | ||| ||||| || || || || ||||| ||| Sbjct 48101 TCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCTTTGTCC 48160 Query 104468 TGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 |||||| ||||| || || || || | || || | || ||||| || || || || Sbjct 48161 TGAATC-TTGCTCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCAAGAGTGATCGT 48219 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || || || || ||||| |||||||| Sbjct 48220 CTTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 48252 >seq64 Length=19946 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || || || || || |||||||| ||||| | ||| || || || || ||||| || ||| Sbjct 14289 TCCTTTTGGATGTTGTAGTCAGAGAGAGTCCGACCATCCTCCAGCTGCTTTCCCGCGAAA 14348 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | ||| || ||||| || || || ||||| ||||||||||| | || ||||| Sbjct 14349 ATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTGAATCTTGGACTTGACATTG 14408 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | || ||||| || ||||| || || || ||||| || || || || || || Sbjct 14409 TCGATTGTGTCGCTGCTCTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACG 14468 Query 104549 AATATCTGCAT 104559 || |||||||| Sbjct 14469 AAGATCTGCAT 14479 >seq124 Length=325275 Score = 86.0 bits (94), Expect = 1e-11 Identities = 134/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| || || || | ||||| || || || || ||| Sbjct 289428 GTCGACTCCTTCTGGATGTTGTAGTCCGACAGGGTCCGGCCGTCCTCGAGCTGCTTGCCA 289487 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| || | ||| || || || || || || || || ||||| ||||| | || Sbjct 289488 GCAAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 289547 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | ||| || ||||| | || || ||||| || ||||| || Sbjct 289548 ACATTGTCGATCGTGTC-CGAGGACTCGACCTCCAAGGTGATGGTCTTGCCCGTAAGGGT 289606 Query 104542 TTTTACAAA 104550 || || || Sbjct 289607 CTTCACGAA 289615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151392336807988