Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq365 134 3e-26
seq64 114 3e-20
seq124 86.0 1e-11
>seq365
Length=144107
Score = 134 bits (148), Expect = 3e-26
Identities = 150/198 (76%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || || || ||||| || | |||||| || || || || |||
Sbjct 48284 GTCGACTCCTTCTGGATGTTGTAATCGGATAGCGTCCGACCGTCCTCGAGCTGCTTGCCA 48343
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481
|| ||||| || | ||| ||||| || || || || ||||| ||||||||| ||||| ||
Sbjct 48344 GCGAAAATGAGGCGCTGCTGATCGGGGGGAATGCCCTCTTTGTCCTGAATC-TTGCTCTT 48402
Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|| || |||| || || | ||| ||||||||||| || ||||| || ||||| ||
Sbjct 48403 GACGTTGTCTATCGTGTCCGACGATTCAACCTCTAGTGTGATGGTCTTGCCGGTAAGCGT 48462
Query 104542 TTTTACAAATATCTGCAT 104559
||| ||||| ||||||||
Sbjct 48463 TTTGACAAAGATCTGCAT 48480
Score = 111 bits (122), Expect = 4e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | ||||| || |||||||| || ||||| || || || | || ||
Sbjct 48041 AGCACCAGATGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGCGTCCGCCCATCC 48100
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| || || || ||||| ||||| || | ||| ||||| || || || || ||||| |||
Sbjct 48101 TCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCTTTGTCC 48160
Query 104468 TGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
|||||| ||||| || || || || | || || | || ||||| || || || ||
Sbjct 48161 TGAATC-TTGCTCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCAAGAGTGATCGT 48219
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| || || || || || ||||| ||||||||
Sbjct 48220 CTTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 48252
>seq64
Length=19946
Score = 114 bits (126), Expect = 3e-20
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| || || || || |||||||| ||||| | ||| || || || || ||||| || |||
Sbjct 14289 TCCTTTTGGATGTTGTAGTCAGAGAGAGTCCGACCATCCTCCAGCTGCTTTCCCGCGAAA 14348
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| || | ||| || ||||| || || || ||||| ||||||||||| | || |||||
Sbjct 14349 ATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTGAATCTTGGACTTGACATTG 14408
Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548
|| | || ||||| || ||||| || || || ||||| || || || || || ||
Sbjct 14409 TCGATTGTGTCGCTGCTCTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACG 14468
Query 104549 AATATCTGCAT 104559
|| ||||||||
Sbjct 14469 AAGATCTGCAT 14479
>seq124
Length=325275
Score = 86.0 bits (94), Expect = 1e-11
Identities = 134/189 (71%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || ||||| || || || | ||||| || || || || |||
Sbjct 289428 GTCGACTCCTTCTGGATGTTGTAGTCCGACAGGGTCCGGCCGTCCTCGAGCTGCTTGCCA 289487
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| || | ||| || || || || || || || || ||||| ||||| | ||
Sbjct 289488 GCAAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 289547
Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
||||| || | || || | ||| || ||||| | || || ||||| || ||||| ||
Sbjct 289548 ACATTGTCGATCGTGTC-CGAGGACTCGACCTCCAAGGTGATGGTCTTGCCCGTAAGGGT 289606
Query 104542 TTTTACAAA 104550
|| || ||
Sbjct 289607 CTTCACGAA 289615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151392336807988
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |