Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq397 86.0 4e-12 >seq397 Length=84776 Score = 86.0 bits (94), Expect = 4e-12 Identities = 133/182 (73%), Gaps = 10/182 (5%) Strand=Plus/Minus Query 44368 CGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCGTCG-T 44426 |||||||||| || || | || ||| | ||| |||| |||||||||||||||||| Sbjct 44063 CGTCAAGGTGCGGGTGCGCACGACCAAGATCCCGCAGATTGGCGACAAGTTTGCGTCGCG 44004 Query 44427 TCACGGCGCAAAAGGGGA-CAT-GCGGAGCCGTCCTGACCCAGGAGGACATGCCCTT--C 44482 |||||| |||||||| | ||| | | | ||| | | || ||||||||||| || | Sbjct 44003 CCACGGC-CAAAAGGGCACCATCGGCGTGACGTACCGGTCC--GAGGACATGCCGTTTAC 43947 Query 44483 GACAAAAACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATG 44542 ||| | || | |||||||| | ||||||||||| |||||| | || || ||||| Sbjct 43946 GAC--CGAGGGCATCCTGCCCGACATTATCATCAACCCGCACGCCATCCCGTCGCGGATG 43889 Query 44543 AC 44544 || Sbjct 43888 AC 43887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340135896229503