Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq365 98.7 9e-16
seq64 89.7 5e-13
>seq365
Length=144107
Score = 98.7 bits (108), Expect = 9e-16
Identities = 152/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
|||| ||||||||||| || |||||||| || | ||| || || || ||| |
Sbjct 47810 CGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGCCCA 47869
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
|||||||| || || || ||||||| | | ||||| ||||| || ||||| || |||
Sbjct 47870 TCCTCCAGTTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCTGGCGGGATACCCTCCTTG 47929
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || |||| ||| || | | | ||||| | || || || | ||| ||
Sbjct 47930 TCTTGGATCTTTGACTTCACATTGTCAATCGTGTCTGACGACTCCACCTCCAACGTAATC 47989
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| || || || || || |||||||||||||||||||
Sbjct 47990 GTCTTGCCCGTGAGCGTCTTCACAAAGATCTGCATGC 48026
Score = 93.3 bits (102), Expect = 4e-14
Identities = 149/212 (70%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855
||||| |||| ||||| ||||| || | ||| || ||| | || || | ||||
Sbjct 48043 CACCAGATGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGG--AAAGCGTCCGCCCATCC 48100
Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915
|| ||||| || || | || || | | |||||||| || ||||| || ||||||||
Sbjct 48101 TCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCTTTGTCC 48160
Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975
| ||| || ||||||| | ||| ||||| | ||||| |||| ||||| ||
Sbjct 48161 TGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCAAGAGTGATCGTC 48220
Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || ||||| || ||||||||||||||
Sbjct 48221 TTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 48252
Score = 91.5 bits (100), Expect = 1e-13
Identities = 152/218 (70%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
|||| || | ||| | || || ||||| || | ||| |||||| |||| || ||
Sbjct 48266 CGCAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGG--ATAGCGTCCGAC 48323
Query 94853 --TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910
||||| ||||| || || | || || | | |||||||| || ||||| || ||||
Sbjct 48324 CGTCCTCGAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGATCGGGGGGAATGCCCTCTT 48383
Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970
|||| | ||| || ||||||| | | | ||||| | || || || | ||||
Sbjct 48384 TGTCCTGAATCTTGCTCTTGACGTTGTCTATCGTGTCCGACGATTCAACCTCTAGTGTGA 48443
Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008
|||| || || ||||| ||||| |||||||||||||||
Sbjct 48444 TGGTCTTGCCGGTAAGCGTTTTGACAAAGATCTGCATG 48481
>seq64
Length=19946
Score = 89.7 bits (98), Expect = 5e-13
Identities = 114/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
|||||||||||| ||||| | || || | | ||||| || || || || || |||||
Sbjct 14324 ATCCTCCAGCTGCTTTCCCGCGAAAATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCTTT 14383
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
||| | ||| || | |||||| | ||| ||||| | ||||| |||| |||||
Sbjct 14384 GTCCTGAATCTTGGACTTGACATTGTCGATTGTGTCGCTGCTCTCGACCTCAAGGGTGAT 14443
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008
||| || || || || || ||||| ||||||||||||
Sbjct 14444 GGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATG 14480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448288896903960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |