Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq365 98.7 9e-16 seq64 89.7 5e-13 >seq365 Length=144107 Score = 98.7 bits (108), Expect = 9e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| ||||||||||| || |||||||| || | ||| || || || ||| | Sbjct 47810 CGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGCCCA 47869 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 |||||||| || || || ||||||| | | ||||| ||||| || ||||| || ||| Sbjct 47870 TCCTCCAGTTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCTGGCGGGATACCCTCCTTG 47929 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || |||| ||| || | | | ||||| | || || || | ||| || Sbjct 47930 TCTTGGATCTTTGACTTCACATTGTCAATCGTGTCTGACGACTCCACCTCCAACGTAATC 47989 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || || || || || ||||||||||||||||||| Sbjct 47990 GTCTTGCCCGTGAGCGTCTTCACAAAGATCTGCATGC 48026 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855 ||||| |||| ||||| ||||| || | ||| || ||| | || || | |||| Sbjct 48043 CACCAGATGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGG--AAAGCGTCCGCCCATCC 48100 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 || ||||| || || | || || | | |||||||| || ||||| || |||||||| Sbjct 48101 TCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCTTTGTCC 48160 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | ||| || ||||||| | ||| ||||| | ||||| |||| ||||| || Sbjct 48161 TGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCAAGAGTGATCGTC 48220 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || ||||| || |||||||||||||| Sbjct 48221 TTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 48252 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| || | ||| | || || ||||| || | ||| |||||| |||| || || Sbjct 48266 CGCAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGG--ATAGCGTCCGAC 48323 Query 94853 --TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 ||||| ||||| || || | || || | | |||||||| || ||||| || |||| Sbjct 48324 CGTCCTCGAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGATCGGGGGGAATGCCCTCTT 48383 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 |||| | ||| || ||||||| | | | ||||| | || || || | |||| Sbjct 48384 TGTCCTGAATCTTGCTCTTGACGTTGTCTATCGTGTCCGACGATTCAACCTCTAGTGTGA 48443 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 |||| || || ||||| ||||| ||||||||||||||| Sbjct 48444 TGGTCTTGCCGGTAAGCGTTTTGACAAAGATCTGCATG 48481 >seq64 Length=19946 Score = 89.7 bits (98), Expect = 5e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||||||||| ||||| | || || | | ||||| || || || || || ||||| Sbjct 14324 ATCCTCCAGCTGCTTTCCCGCGAAAATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCTTT 14383 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | ||| || | |||||| | ||| ||||| | ||||| |||| ||||| Sbjct 14384 GTCCTGAATCTTGGACTTGACATTGTCGATTGTGTCGCTGCTCTCGACCTCAAGGGTGAT 14443 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 ||| || || || || || ||||| |||||||||||| Sbjct 14444 GGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATG 14480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448288896903960