Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq380 104 4e-18 seq357 104 4e-18 >seq380 Length=116834 Score = 104 bits (114), Expect = 4e-18 Identities = 85/101 (84%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||| |||||| || |||||||| || || |||||||| ||||| Sbjct 114184 GCGAAGCGTCACCGGAAGAT-TCTTCGTGACAACATCCAGGGTATTACCAAGCCCGCTAT 114242 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 || ||||| |||||||||||||| ||||||||| |||||| Sbjct 114243 TCGGCGTCTTGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 114283 >seq357 Length=664841 Score = 104 bits (114), Expect = 4e-18 Identities = 85/101 (84%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||||||| |||| |||||| || |||||||| || || || ||||| ||||| Sbjct 505646 GCCAAGCGTCATCGCAAGAT-TCTTCGTGACAACATCCAGGGTATTACTAAGCCCGCTAT 505588 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||| |||| |||||||| || ||||||||| |||||| Sbjct 505587 CCGCCGTTTGGCGCGTCGTGGCGGTGTCAAGCGTATCTCTG 505547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074824219823