Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq401 136 5e-27 >seq401 Length=585928 Score = 136 bits (150), Expect = 5e-27 Identities = 432/663 (65%), Gaps = 14/663 (2%) Strand=Plus/Plus Query 63183 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63242 || ||||||| | ||| || || | | || ||| || ||||| || |||||||| ||| Sbjct 361358 GGGCACATCAGTGTCCAATCGCCATTCTTCTCCACACGCTTCATGAACAGATCAGGGATC 361417 Query 63243 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63302 || || || | || ||||| | || | ||||| || || ||||| ||| Sbjct 361418 CAGAGGGCGAGGAACAGATCGCGGGCACGGATCTCCTCCTTGCCATGGTTCTTGCGCAGA 361477 Query 63303 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63362 ||||| ||| | | | ||| | ||||| || || | ||||||| | | | || || Sbjct 361478 TCGAGAAACTCAAAGACATCGGCGTGCCAAGGCTCAAGGTATATGCAGAAAGCACCGGGG 361537 Query 63363 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63422 || |||||||| ||||| || | || | || ||||| || || || | | ||| || Sbjct 361538 CGCTTGTTTCCGCCCTGGTCCACATAGCGTGCCGTGTTGTTGTAGACACGGAGCATAGGG 361597 Query 63423 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATAT-- 63480 || || ||||| ||| | || || || |||| || ||| ||| | || || || Sbjct 361598 ATGATGCCGTTGGATGTGCCGTTTGTGCCGGCAATGTAGGAGCCAGTAGCCCGGATGCGG 361657 Query 63481 TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 63540 | ||||| | || ||||| || ||| | || ||||| | || || || | | Sbjct 361658 TGGACATTGA--GGCCAATTCCACCGGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGG 361715 Query 63541 TGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTT 63600 |||| ||||||||||| ||||| ||||| |||||| | || || ||| ||||| | Sbjct 361716 TGTCGTAGATACCCTCGATGCTGTCATCCTTCATGTCCACGAGGAAGCAGGAGGACATCT 361775 Query 63601 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA-TTTTTCA 63659 || | || || || || || | || || || || ||||| || | || ||| Sbjct 361776 GGGCCTGTGGGGTGCCGGCGTTGAAGAGCGTGGGCGAGGCATGCGTGAAGAACTTGTTCG 361835 Query 63660 GAAAGTAGATTGTACGTCTCAATAGCTGAGTCTA---TATC-CCATTGATGAATTCCTAC 63715 | |||| ||||| ||||| | | | || | | || || |||| || || Sbjct 361836 ACATGTAG-TTGTATGTCTCGACAACACGCTCCACGTTGTCACCCCAGATG----CCCAC 361890 Query 63716 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAA 63775 || || ||||| | ||||||||| || | ||| || |||||| ||| | || | || Sbjct 361891 TGACACGCGCATGATCATGTGCTGTGGCCGTTCGACAATCTTGCCGTTCAGCTTGAGCAG 361950 Query 63776 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 63835 |||||| |||| || || || ||||| || | ||| ||||| || || |||| Sbjct 361951 GTAGGACCGCTCCAGGGTCTTGAAGCCAAAGTATTGGTAATTGAAGTCACGGTCATAAAC 362010 Query 63836 AAT 63838 ||| Sbjct 362011 AAT 362013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622943999608760