Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq401 136 5e-27
>seq401
Length=585928
Score = 136 bits (150), Expect = 5e-27
Identities = 432/663 (65%), Gaps = 14/663 (2%)
Strand=Plus/Plus
Query 63183 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63242
|| ||||||| | ||| || || | | || ||| || ||||| || |||||||| |||
Sbjct 361358 GGGCACATCAGTGTCCAATCGCCATTCTTCTCCACACGCTTCATGAACAGATCAGGGATC 361417
Query 63243 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63302
|| || || | || ||||| | || | ||||| || || ||||| |||
Sbjct 361418 CAGAGGGCGAGGAACAGATCGCGGGCACGGATCTCCTCCTTGCCATGGTTCTTGCGCAGA 361477
Query 63303 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63362
||||| ||| | | | ||| | ||||| || || | ||||||| | | | || ||
Sbjct 361478 TCGAGAAACTCAAAGACATCGGCGTGCCAAGGCTCAAGGTATATGCAGAAAGCACCGGGG 361537
Query 63363 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63422
|| |||||||| ||||| || | || | || ||||| || || || | | ||| ||
Sbjct 361538 CGCTTGTTTCCGCCCTGGTCCACATAGCGTGCCGTGTTGTTGTAGACACGGAGCATAGGG 361597
Query 63423 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATAT-- 63480
|| || ||||| ||| | || || || |||| || ||| ||| | || || ||
Sbjct 361598 ATGATGCCGTTGGATGTGCCGTTTGTGCCGGCAATGTAGGAGCCAGTAGCCCGGATGCGG 361657
Query 63481 TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 63540
| ||||| | || ||||| || ||| | || ||||| | || || || | |
Sbjct 361658 TGGACATTGA--GGCCAATTCCACCGGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGG 361715
Query 63541 TGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTT 63600
|||| ||||||||||| ||||| ||||| |||||| | || || ||| ||||| |
Sbjct 361716 TGTCGTAGATACCCTCGATGCTGTCATCCTTCATGTCCACGAGGAAGCAGGAGGACATCT 361775
Query 63601 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA-TTTTTCA 63659
|| | || || || || || | || || || || ||||| || | || |||
Sbjct 361776 GGGCCTGTGGGGTGCCGGCGTTGAAGAGCGTGGGCGAGGCATGCGTGAAGAACTTGTTCG 361835
Query 63660 GAAAGTAGATTGTACGTCTCAATAGCTGAGTCTA---TATC-CCATTGATGAATTCCTAC 63715
| |||| ||||| ||||| | | | || | | || || |||| || ||
Sbjct 361836 ACATGTAG-TTGTATGTCTCGACAACACGCTCCACGTTGTCACCCCAGATG----CCCAC 361890
Query 63716 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAA 63775
|| || ||||| | ||||||||| || | ||| || |||||| ||| | || | ||
Sbjct 361891 TGACACGCGCATGATCATGTGCTGTGGCCGTTCGACAATCTTGCCGTTCAGCTTGAGCAG 361950
Query 63776 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 63835
|||||| |||| || || || ||||| || | ||| ||||| || || ||||
Sbjct 361951 GTAGGACCGCTCCAGGGTCTTGAAGCCAAAGTATTGGTAATTGAAGTCACGGTCATAAAC 362010
Query 63836 AAT 63838
|||
Sbjct 362011 AAT 362013
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622943999608760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |