Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq401 361 1e-94 >seq401 Length=585928 Score = 361 bits (400), Expect = 1e-94 Identities = 1064/1624 (66%), Gaps = 22/1624 (1%) Strand=Plus/Minus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 |||||||| ||| |||| || | | ||| || || || | | | |||||||| || Sbjct 361824 TTCACGCATGCCTCGCCCACGCTCTTCAACGCCGGCACCCCACAGGCCCAGATGTCCTCC 361765 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | | |||||||| || |||||||||||||| ||||| || |||| Sbjct 361764 TGCTTCCTCGTGGACATGAAGGATGACAGCATCGAGGGTATCTACGACACCCTCAAGACC 361705 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC- 363725 ||||| | || ||||||| || || |||||||| | ||||| | || || Sbjct 361704 TGTGCCATGATCTCCAAGACGGCCGGTGGAATTGGCCTCAATGTCCACCGCATCCGGGCT 361645 Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785 || | | |||||| ||||||| || || || || | | || ||||| || Sbjct 361644 ACTGG-CTCCTACATTGCCGGCACAAACGGCACATCCAACGGCATCATCCCTATGCTCCG 361586 Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845 ||| | |||| || || | || || |||||||| ||| |||||| || || || Sbjct 361585 TGTCTACAACAACACGGCACGCTATGTGGACCAGGGCGGAAACAAGCGCCCCGGTGCTTT 361526 Query 363846 -TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904 ||| || || || |||||| || |||||| | ||||||||||| || || || || | Sbjct 361525 CTGC-ATATACCTTGAGCCTTGGCACGCCGATGTCTTTGAGTTTCTCGATCTGCGCAAGA 361467 Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964 || || || ||||| | ||||| || ||||||||| || || ||| | |||| | Sbjct 361466 ACCATGGCAAGGAGGAGATCCGTGCCCGCGATCTGTTCCTCGCCCTCTGGATCCCTGATC 361407 Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAATG 364022 || |||||||| |||||| | | | | ||||| |||| | ||||| |||| || Sbjct 361406 TGTTCATGAAGCGTGTGGAG--AAGAATGGCGATTGGACACTGATGTGCCCCAACGAGTG 361349 Query 364023 TCCAGGTCTTTCCGA-TG-TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAA 364080 || || | | || || ||||| | |||| | || || || ||||| |||||||| Sbjct 361348 CCCCGGCATGGCGGACTGCTATGGCG--ACGAGTTTGAGGCCCTGTACGAGAAGTATGAG 361291 Query 364081 TCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGAT 364140 || || | ||||||||| || || |||||||| |||| ||||| | || Sbjct 361290 CGCGAAGGTCGCGGTCGTAAGACGATCAAGGCCCAGAAGCTCTGGTACGCCATTCTCGAA 361231 Query 364141 TCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCC 364200 | |||| ||||| || | || | ||| | ||||| || |||||||||||| | Sbjct 361230 GCCCAGACGGAGACGGGCAACCCGTTCATGCTCTACAAGGACCACTGCAACCGCAAGAGC 361171 Query 364201 AACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATA 364259 |||||| || |||| || || || | |||| | ||||| || || ||||| | || || Sbjct 361170 AACCAGAAGAACCTGGGCACCATCC-GCAGCTCCAACCTGTGCACGGAGATCGTGGAGTA 361112 Query 364260 CACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319 | | || || || ||| || || || ||| | || || | || || ||| | || || Sbjct 361111 CTCTGCCCCAGATGAGGTGGCTGTTTGCAACTTGGCCTCTCTGGCCCTGCCGTCTTTCGT 361052 Query 364320 AAAAGAT------GGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTAC 364373 | | | || | ||| | || | ||| | || || | | | || | Sbjct 361051 TGACTACACCAACGAGACATACGACTTCAAGAAGCTTCACGAGGTTGCACAGC-TGGTCG 360993 Query 364374 TT-GCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTT 364432 | |||| || || | || || ||| || || || || | || || ||| || Sbjct 360992 TCCGCAACCTGAACCACGTCATTGACGTCAACTACTACCCTGTGCCGGAGGCCAAGAACA 360933 Query 364433 CTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGA 364492 || ||||| ||||| || || ||||| ||||| ||||| || || || | || || Sbjct 360932 GCAACATGCGCCATCGGCCTATCGGTCTGGGTGTGCAGGGACTGGCGGATGCCTTCTTGG 360873 Query 364493 TGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAA 364552 || ||| | || || ||||| || || |||| || || ||| | |||||||| | Sbjct 360872 CTCTGCGCATGCCCTTCGAGTCGCCCGAGGCCCGTGAGCTCAACAAGCAAATCTTTGAGA 360813 Query 364553 CAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACT 364612 | || || ||||| |||| || ||||| ||| |||| || | | |||| | |||| Sbjct 360812 CCATTTACCACGCCGCTCTGACGGCGTCGTGCGATCTGGCCAAGATCGAGGGCACCTACT 360753 Query 364613 CTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCA 364672 | || || ||||| || || | || ||||| | | || || | ||| | || | Sbjct 360752 CGACGTACGAGGGCTCTCCCGTGTCTCAGGGCATTCTGCAACCCGACATGTGGGACGTGA 360693 Query 364673 CGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTC 364732 ||| |||| || ||| ||||||| |||| ||| || ||||| |||| || | Sbjct 360692 AGCCGTCTGACCTGTGGGACTGGGACTCGCTGCGTCTGAAGATTAAGGAGCACGGCGTGC 360633 Query 364733 GCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACA 364792 ||||| || | || |||||||| || || || || | ||||| || || |||| Sbjct 360632 GCAACAGTCTGCTGGTGGCCCCCATGCCGACAGCGTCGACGTCGCAGATTCTGGGCAACA 360573 Query 364793 ACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAAT 364852 ||||||||||||| |||| || ||| | || || ||||| || || | || || | Sbjct 360572 ACGAGTGCTTCGAGCCGTACACGTCCAACATCTACTCGCGCCGTGTGCTGGCGGGCGAGT 360513 Query 364853 TTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACA 364912 | | ||| || || || || | |||||||| ||| || |||||| |||| Sbjct 360512 TCCAGGTGGTCAACCCGTGGCTGCTGAAGGATCTCGTTGACATGGGTCTGTGGTCGGACA 360453 Query 364913 GCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAG 364972 |||||||||| ||||| |||| ||||| | |||||||| || | || | Sbjct 360452 ACATGAAGAACCGCATCATTGCCGAGGGCGGTTCGATCCAGAACATCCCCAACATCCCGG 360393 Query 364973 AAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATA 365032 || | ||| || | ||||| ||||| ||||| || ||| ||| || | | | | Sbjct 360392 CCGACATCAAGGCTCTCTACAAGACCGTGTGGGAGATCTCCCAGCGCACGATTGTGCAGA 360333 Query 365033 TGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTC 365092 |||| ||||| || || || |||||| ||| |||||| | ||| | |||| Sbjct 360332 TGGCCGCCGACCGGGGCGCATTTATCGACCAGTCGCAGTCGCTGAACATCCACATGCGCG 360273 Query 365093 AGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGA 365152 |||| ||| | |||| | || |||||| ||| ||| ||||| ||||| |||| Sbjct 360272 AGCCCACCATGGGCAAGATCACGAGCATGCACTTCGCCGGCTGGAAGCTGGGTCTCAAGA 360213 Query 365153 CAGG 365156 | || Sbjct 360212 CGGG 360209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303346736621402