Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq365 95.1 1e-14 seq64 95.1 1e-14 seq124 82.4 6e-11 >seq365 Length=144107 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| |||| |||||||| |||||||| || ||||||||||| | Sbjct 47570 CCGCCACGCAGACGCAGCACCAGGTGCAGCGTTGACTCCTTCTGGATGTTGTAGTCCGAA 47629 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || ||||||||| || ||||| ||| | || |||||||| ||||| || Sbjct 47630 AGTGTGCGTCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCTGGCGGG 47689 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| ||||| || | | ||| || | | | | || || || |||| Sbjct 47690 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATCGTATCCGAGGACTCCACC 47749 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | || || || ||||| |||| ||| ||||| || |||||||| Sbjct 47750 TCAAGCGTAATCGTCTTTCCTGTCAACGTCTTGACGAAGATCTGCAT 47796 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| |||| |||||||| || ||||| || ||||||||||| | | Sbjct 47798 CCGCCGCGAAGACGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCCGAC 47857 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| ||| ||||| ||| | || || ||||| ||||| || Sbjct 47858 AGGGTGCGCCCATCCTCCAGTTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCTGGCGGG 47917 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || |||| |||||| | | | | ||||| | |||| Sbjct 47918 ATACCCTCCTTGTCTTGGATCTTTG--ACTTCACATTGTCAATCGTGTCTGACGACTCCA 47975 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || || || || || || ||||| || ||||| |||||||| Sbjct 47976 CCTCCAACGTAATCGTCTTGCCCGTGAGCGTCTTCACAAAGATCTGCAT 48024 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||||||| |||||||| || ||||||||||||| | || | ||| Sbjct 48041 AGCACCAGATGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGCGTCCGCCCATCC 48100 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || ||||| || |||| || ||||| || || || | |||||||||||| Sbjct 48101 TCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCTTTGTCC 48160 Query 16844 GCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 ||| ||||| ||| || | | | | ||||| | ||| || | ||||| || Sbjct 48161 TGAATCTTGCT-CTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCAAGAGTGATCGT 48219 Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| |||||||| Sbjct 48220 CTTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 48252 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| || | || ||||| |||||||| || |||||||| |||| Sbjct 48254 CCACCACGCAGACGCAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGAT 48313 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || ||||||| | || ||||| || |||| || ||||| || || || Sbjct 48314 AGCGTCCGACCGTCCTCGAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGATCGGGGGGA 48373 Query 16829 ACGCCCTCTTTGTCGGCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | |||||||||||| ||| ||||| ||| || | | | | ||||| | || Sbjct 48374 ATGCCCTCTTTGTCCTGAATCTTGCT-CTTGACGTTGTCTATCGTGTCCGACGATTCAAC 48432 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| || ||||| |||||||||||||| |||||||| Sbjct 48433 CTCTAGTGTGATGGTCTTGCCGGTAAGCGTTTTGACAAAGATCTGCAT 48480 >seq64 Length=19946 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || |||| || |||| || |||||| ||||||||| ||||||||||| | Sbjct 14253 CCGCCACGGAGCCGAAGCACCAGGTGGAGCGTGCTCTCCTTTTGGATGTTGTAGTCAGAG 14312 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | ||||||| || || ||||| |||| || ||||| ||||| || Sbjct 14313 AGAGTCCGACCATCCTCCAGCTGCTTTCCCGCGAAAATCAGGCGCTGCTGGTCAGGGGGG 14372 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||||||||| ||| | ||| || | | | | ||||||| | ||| Sbjct 14373 ATGCCCTCTTTGTCCTGAATCTTGGACTTGACATTGTCGATTGTGTCGCTGCTCTCGACC 14432 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| || || ||||| || || || || |||||||| Sbjct 14433 TCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 14479 >seq124 Length=325275 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| || |||||||| || ||||||||||| | || ||| | ||||| Sbjct 289413 AGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGACAGGGTCCGGCCGTCC 289472 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || ||||| ||| |||| || ||||| ||||| || | |||||| ||||| Sbjct 289473 TCGAGCTGCTTGCCAGCAAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 289532 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | ||| || | | | | ||||| || ||| |||| ||||||||| Sbjct 289533 TGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTC 289592 Query 16904 TTTCCGGTCAGCGTTTTGACAAA 16926 || || || || || || || || Sbjct 289593 TTGCCCGTAAGGGTCTTCACGAA 289615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405085970888890