Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_008187.1
Length=191100
Score E
Sequences producing significant alignments: (Bits) Value
seq401 86.0 8e-12
seq397 82.4 9e-11
>seq401
Length=585928
Score = 86.0 bits (94), Expect = 8e-12
Identities = 115/160 (72%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 15036 GCCAGATGCGCACGCCCGAGATTGGCGACAAGTTTTGCTCTGGTATGGCGCAAAAGGGCA 15095
|||||| ||| |||||||||||||||||||| | || | | ||||||||||
Sbjct 425116 GCCAGACGCGGCGACCCGAGATTGGCGACAAGTTCTCGTCGCGCCACGGGCAAAAGGGCG 425175
Query 15096 CGTGCGGCATGATTTTCCCCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCG 15155
| ||||| ||| | ||||| |||||||| ||| | | || || || ||| |
Sbjct 425176 TGGTGGGCATCATTGTGGAGCAGGAGGACATGCCGTTTGCAGACTCGGGGCTGGTGCCGG 425235
Query 15156 ACATTATCATCAACCCCAACTGCATCCCGTCCCGCATGAC 15195
|||||||||| ||||| || || |||||| ||||||||
Sbjct 425236 ACATTATCATGAACCCGCACGGCTACCCGTCGCGCATGAC 425275
>seq397
Length=84776
Score = 82.4 bits (90), Expect = 9e-11
Identities = 111/151 (74%), Gaps = 3/151 (2%)
Strand=Plus/Minus
Query 15050 CCCG-AGATTGGCGACAAGTTTTGCTCTGGT-ATGGCGCAAAAGGGCACGTGCGGCATGA 15107
|||| ||||||||||||||||| || | | ||| ||||||||||| |||| |||
Sbjct 44033 CCCGCAGATTGGCGACAAGTTTGCGTCGCGCCACGGC-CAAAAGGGCACCATCGGCGTGA 43975
Query 15108 TTTTCCCCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATCA 15167
| || || |||||||| ||||| | ||||| |||||||||||||||||
Sbjct 43974 CGTACCGGTCCGAGGACATGCCGTTTACGACCGAGGGCATCCTGCCCGACATTATCATCA 43915
Query 15168 ACCCCAACTGCATCCCGTCCCGCATGACCAT 15198
|||| || ||||||||| || ||||| ||
Sbjct 43914 ACCCGCACGCCATCCCGTCGCGGATGACGAT 43884
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 611388858973600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |