Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq401 86.0 8e-12 seq397 82.4 9e-11 >seq401 Length=585928 Score = 86.0 bits (94), Expect = 8e-12 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 15036 GCCAGATGCGCACGCCCGAGATTGGCGACAAGTTTTGCTCTGGTATGGCGCAAAAGGGCA 15095 |||||| ||| |||||||||||||||||||| | || | | |||||||||| Sbjct 425116 GCCAGACGCGGCGACCCGAGATTGGCGACAAGTTCTCGTCGCGCCACGGGCAAAAGGGCG 425175 Query 15096 CGTGCGGCATGATTTTCCCCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCG 15155 | ||||| ||| | ||||| |||||||| ||| | | || || || ||| | Sbjct 425176 TGGTGGGCATCATTGTGGAGCAGGAGGACATGCCGTTTGCAGACTCGGGGCTGGTGCCGG 425235 Query 15156 ACATTATCATCAACCCCAACTGCATCCCGTCCCGCATGAC 15195 |||||||||| ||||| || || |||||| |||||||| Sbjct 425236 ACATTATCATGAACCCGCACGGCTACCCGTCGCGCATGAC 425275 >seq397 Length=84776 Score = 82.4 bits (90), Expect = 9e-11 Identities = 111/151 (74%), Gaps = 3/151 (2%) Strand=Plus/Minus Query 15050 CCCG-AGATTGGCGACAAGTTTTGCTCTGGT-ATGGCGCAAAAGGGCACGTGCGGCATGA 15107 |||| ||||||||||||||||| || | | ||| ||||||||||| |||| ||| Sbjct 44033 CCCGCAGATTGGCGACAAGTTTGCGTCGCGCCACGGC-CAAAAGGGCACCATCGGCGTGA 43975 Query 15108 TTTTCCCCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATCA 15167 | || || |||||||| ||||| | ||||| ||||||||||||||||| Sbjct 43974 CGTACCGGTCCGAGGACATGCCGTTTACGACCGAGGGCATCCTGCCCGACATTATCATCA 43915 Query 15168 ACCCCAACTGCATCCCGTCCCGCATGACCAT 15198 |||| || ||||||||| || ||||| || Sbjct 43914 ACCCGCACGCCATCCCGTCGCGGATGACGAT 43884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611388858973600