Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq222 109 1e-18
seq2 109 1e-18
seq401 105 1e-17
seq68 96.9 7e-15
seq404 86.0 1e-11
seq223 86.0 1e-11
seq200 86.0 1e-11
seq112 86.0 1e-11
>seq222
Length=676535
Score = 109 bits (120), Expect = 1e-18
Identities = 247/364 (68%), Gaps = 8/364 (2%)
Strand=Plus/Minus
Query 87559 AAGGCCGGCAATCTTCGCGATGCTTTTGCCAAGAC-GAGCGCACCATTCTTTGTCATCTT 87617
||||||||||| || ||| || ||| || || ||| || | | |||| |||||||
Sbjct 328882 AAGGCCGGCAACCTCCGCTGGGCCTTTTCCCGCACCGAGGGCGAC-TACTTTATCATCTT 328824
Query 87618 CGATGCTGACTTCTGCCCGCGCAAGGACTTCATCACGGAAATTATGCCATACTTCAACTA 87677
|| || || |||||||| ||| ||| ||||| || | ||| | || ||
Sbjct 328823 TGACGCCGATTTCTGCCCCCGCCCCGACCTCATCCGCGAGCTC--GCCGTCGAGCACCTC 328766
Query 87678 --TGACAAATCCATCGCCATCGTCCAGACCCCCCAGTTCTTTGAGGTGCGT-CCAGACCA 87734
|||| | || |||||||||||||| ||||||| ||||| || ||| || || ||
Sbjct 328765 GCTGACCACACCGTCGCCATCGTCCAGTCCCCCCAATTCTTCCGCGT-CGTGCCCGAGCA 328707
Query 87735 GACTTGGGTAGAGCGTGCTGCAGGTTCTGTCCAGGAACTGTTCTACCGCTTCATCCAGGT 87794
||| ||||| |||| | || || | |||||| || ||||||||| || |||||||
Sbjct 328706 GACCTGGGTTGAGCAGGGCGCCGGCGCCACCCAGGAGCTCTTCTACCGCGTCGTCCAGGT 328647
Query 87795 GTCTCGCGAATCATTTGGCGCTGCAGTGTGCGTGGGTACTTGTGCTATGTATCGTCGCGA 87854
||| | | ||||| | | ||||| || | ||| ||||| || ||||
Sbjct 328646 CAACCGCAACCGCTGGGGCGCCTCTATCTGCGTCGGCAGCAATGCCATGTACCGCCGCGC 328587
Query 87855 GGCCCTGGTGCCATTTGGCGGCACTGCTGAAATCGGTTTCAGCGAGGATGTCCACACCGG 87914
||||||| | | || ||||| ||||| || || ||| ||| || || ||||||||
Sbjct 328586 CGCCCTGGATGAAGTCGGTGGCACCGCTGACATTGGCTTCTCCGAAGACGTACACACCGG 328527
Query 87915 TTTC 87918
|||
Sbjct 328526 CTTC 328523
Score = 95.1 bits (104), Expect = 2e-14
Identities = 242/367 (66%), Gaps = 10/367 (3%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| |||| ||||| ||||||||||||||||||||| |||
Sbjct 132093 TCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 132034
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
| |||| |||| || |||||| || || | | |||||| || || ||||| |
Sbjct 132033 GAGCGGTACACCTTGTCATTGCCAAGAGCAACCAGTAGGCGGTCGGCAACGAACTCAATG 131974
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
|| || ||| || ||||||||||| | | | || |||| ||||| | |
Sbjct 131973 TATTGCTTCATGAGGGTGGAGTTCATGCCGAGAAGAGCGCAGGGAAGCGCCTCGGTCAGG 131914
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG--TGCCAGAG 251797
|| |||| || | || || || | | || ||| ||| ||| |||
Sbjct 131913 AACTCCTGCTCAATCTTGACAGCATCGACAATGATATCCTCGATCAGCTGCTTGC----- 131859
Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGT 251857
| | ||||| || | ||| | || || | |||| | |||||| |||||||
Sbjct 131858 TCGGGCGGTTCTTGAGATGCGAGAAGAGCAGGCAGGCAAAGTCGGTGTGCAGGCCCTCGT 131799
Query 251858 CGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCC 251917
| ||| || | |||||| || | |||||||||||||| ||||| ||| | | ||
Sbjct 131798 CACGAGAAATAAGCTCGTTCGAGAATGTCAGGCCAGGCATCAGGCCACGCTTCTTCAACC 131739
Query 251918 AGAAGAT 251924
|||||||
Sbjct 131738 AGAAGAT 131732
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| |
Sbjct 675983 GCCCGGTTAGCTCAATCGGTAGAGCGTAAGACTCTTAATCTTAAGGTTGCGGGTTCGACC 676042
Query 142564 CCCACATCGGGC 142575
||| ||||||||
Sbjct 676043 CCCGCATCGGGC 676054
>seq2
Length=564189
Score = 109 bits (120), Expect = 1e-18
Identities = 159/222 (72%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|| ||||| ||||| |||| ||||||||||| || |||| ||||||||||| |||
Sbjct 250404 GGCGAGGACCTGTGCAACTGCACGTTCTCGCTCGCCTACGGTGCCAAGATTCTGCTGAAC 250345
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
||| |||| | | ||||||||| | || || ||||| ||||||||| || |
Sbjct 250344 CAGACCAGCCTGCGCCTGAAGCGTGGCCAGCGCTACGGTCTGTGCGGTCCCAACGGTTCC 250285
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| ||| ||| || ||||||||||| |||| ||| | | ||| ||||| | |||
Sbjct 250284 GGCAAGTCCACCCTGATGCGCGCCATCAACAACGAGCAGGTCG-AGGGTTTCCCGAAGCA 250226
Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565
||||| | ||| |||| || ||||||||| | |||||
Sbjct 250225 GAGCGAGGTCAAGACCGTGTTCGTCGAGCACGACCTGGACTC 250184
>seq401
Length=585928
Score = 105 bits (116), Expect = 1e-17
Identities = 360/559 (64%), Gaps = 18/559 (3%)
Strand=Plus/Minus
Query 218486 TGGACCAGTCGAAGACCAACATCCCCGTCCCTGACTTCATCGACAAGGAGCTCATTCTTT 218545
|||||||||||| | | |||| | | | |||||| || |||||||||| || || |
Sbjct 157694 TGGACCAGTCGACAAAGAGCATCACGTACTCGGACTTCGTCAACAAGGAGCTGATCCTGT 157635
Query 218546 TCTCGCGGTATGATGTGGAGCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGC 218605
|| | |||| ||| || || || || || || || |||||||| |
Sbjct 157634 TCAGTATGGCTGATAACATGCGCTCAATCCCGTCTGTCGTCGACGGACTCAAGCCCGGTC 157575
Query 218606 AGCGTAAGATCCTCTT----TGCCGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTC 218661
|||| ||| || ||| |||| | ||| |||| | || | || |||||
Sbjct 157574 AGCGCAAGGTCATCTACACGTGCC----TGAAGAAGAACATTGTCAAGGACCAGAAGGTG 157519
Query 218662 GCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTG 218721
| |||| | || | ||||||| || | ||| ||||| |||||||| | |||
Sbjct 157518 TTTGAGTTGGCCGGCTCTGTATCCAAACTGGCTGCTTACCACCACGGTGATGCGTCGCTG 157459
Query 218722 CAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTG 218781
|| ||||||| ||| |||||||| ||| ||| ||| |||||||| |||| |||
Sbjct 157458 CACCAGACCATTGTCGGCCTGGCACAGAACTTTGTCGGCTCCAACAACATCAACTGTCTG 157399
Query 218782 CTCCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGG 218841
|||| |||| | |||||||||||||| | ||||| || |||| ||| |
Sbjct 157398 GAACCCAGCGGTAACTTTGGTTCTCGTCTTTCCGGTGGCTCCGACGCTGCTAGTGCTCGA 157339
Query 218842 TATATCTTTACAAAGTTGTCGCCCGTGACGCGCCAGGTGTTCAA---TCAGGCCGATGAT 218898
|| || || || |||||||| | | |||| |||||||| || || ||| |
Sbjct 157338 TACATTTTCACCCGTCTGTCGCCCTTTGCTCGCCGTGTGTTCAATCCTCTGGACGAGCCT 157279
Query 218899 GTGCTCCTTAAGTATCTTGAGGACG--ATGGTTCTTCGATTGAGCCCGAGTGGTATGTGC 218956
|||||| || | |||| || | | ||| || ||||| || || | |
Sbjct 157278 GTGCTCGAGAACAACATTGACGAGGGCAGCGTT-----ATCGAGCCGAAGAACTACGCCC 157224
Query 218957 CTGCTATTCCGTTTTTGCTCGTAAATGGTGCCAATGGTATCGGGACAGGGTTCAGTACTG 219016
| | | ||| | | || || ||||||||| |||||||||| || || | || ||
Sbjct 157223 CCATTGTGCCGATGGTTCTGGTCAATGGTGCCGATGGTATCGGCACCGGTTGGAGCACGT 157164
Query 219017 ACATTCCTTCTTACAATCC 219035
|||||| |||||||||
Sbjct 157163 CCATTCCCAATTACAATCC 157145
>seq68
Length=355481
Score = 96.9 bits (106), Expect = 7e-15
Identities = 136/189 (72%), Gaps = 8/189 (4%)
Strand=Plus/Minus
Query 280176 ATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGAC---C 280232
||||| || || ||||| || ||||||||||| ||||| | || ||||||||||| |
Sbjct 266910 ATTGGCCCGAACGGTGCCGGAAAGTCTACCCTCATCAAGCTGCTTACTGGCGAGACGATC 266851
Query 280233 CAGGCCA-CTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCA 280291
| | | | | || |||| |||||| |||||| |||| || | ||| || ||
Sbjct 266850 CCGTCGACCGGAAAGGTC----GAGAAGCACCCCAACTTGCGTATCGGCTACATCAAGCA 266795
Query 280292 GCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTG 280351
|||||| | | ||| |||| | |||||||| | ||| || ||||| ||| | |||||
Sbjct 266794 ACACGCTCTGGAGCACGTCGAAATGCACCTGGAGAAGACACCGAACCAGTACCTCCAGTG 266735
Query 280352 GCGCTATGC 280360
||| |||||
Sbjct 266734 GCGTTATGC 266726
>seq404
Length=77058
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| |
Sbjct 20852 GCCCGGTTAGCTCAATCGGTAGAGCGTAAGACTCTTAATCTTAAGGTTGCGGGTTCGACC 20911
Query 142564 CCCACATCGGGC 142575
||| ||||||||
Sbjct 20912 CCCGCATCGGGC 20923
>seq223
Length=273046
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| |
Sbjct 207109 GCCCGGTTAGCTCAATCGGTAGAGCGTAAGACTCTTAATCTTAAGGTTGCGGGTTCGACC 207050
Query 142564 CCCACATCGGGC 142575
||| ||||||||
Sbjct 207049 CCCGCATCGGGC 207038
>seq200
Length=274600
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| |
Sbjct 36287 GCCCGGTTAGCTCAATCGGTAGAGCGTAAGACTCTTAATCTTAAGGTTGCGGGTTCGACC 36346
Query 142564 CCCACATCGGGC 142575
||| ||||||||
Sbjct 36347 CCCGCATCGGGC 36358
>seq112
Length=899748
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| |
Sbjct 207170 GCCCGGTTAGCTCAATCGGTAGAGCGTAAGACTCTTAATCTTAAGGTTGCGGGTTCGACC 207111
Query 142564 CCCACATCGGGC 142575
||| ||||||||
Sbjct 207110 CCCGCATCGGGC 207099
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027831387475651
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |