Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq365 118 9e-22 seq64 91.5 1e-13 >seq365 Length=144107 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | || | ||| | |||||| || || ||||||||||| ||| Sbjct 48023 ATGCCACCACGGAGACGGAGCACCAGATGCAGCGTAGACTCCTTCTGAATGTTGTAGTCG 48082 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||| ||||| || || |||||| | ||||||||||| || || || Sbjct 48083 GAAAGCGTCCGCCCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGG 48142 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| |||||||| |||||| || | | || | ||||| | || ||| Sbjct 48143 GGAATGCCCTCTTTGTCCTGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGACGACTCG 48202 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||| ||||| |||||||| || ||||| |||||||| Sbjct 48203 ACCTCAAGAGTGATCGTCTTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 48252 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | || || | || | ||| || || || || |||||||||||| Sbjct 48251 ATACCACCACGCAGACGCAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCG 48310 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || ||| || || || || || |||||| | ||||| ||||| || || || Sbjct 48311 GATAGCGTCCGACCGTCCTCGAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGATCGGGG 48370 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| |||||||| |||||| || | | || | ||||| | ||||| Sbjct 48371 GGAATGCCCTCTTTGTCCTGAATCTTGCTCTTGACGTTGTCTATCGTGTCCGACGATTCA 48430 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | || | || |||||||| || ||||| ||||| ||||||||| Sbjct 48431 ACCTCTAGTGTGATGGTCTTGCCGGTAAGCGTTTTGACAAAGATCTGCATG 48481 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || ||||| || || | || || || || | ||| ||||| || ||||||||||| || Sbjct 47795 ATGCCGCCGCGAAGACGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCC 47854 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || ||| || ||||| || || || |||| |||||||| ||||| || Sbjct 47855 GACAGGGTGCGCCCATCCTCCAGTTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCTGGC 47914 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| |||||| || | | |||| ||||| | || || Sbjct 47915 GGGATACCCTCCTTGTCTTGGATCTTTGACTTCACATTGTCAATCGTGTCTGACGACTCC 47974 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| || | ||| ||||| || || || || ||||| ||||||||| Sbjct 47975 ACCTCCAACGTAATCGTCTTGCCCGTGAGCGTCTTCACAAAGATCTGCATG 48025 >seq64 Length=19946 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || ||||| |||||||| || | ||| ||| ||| || || || || || ||| | Sbjct 14289 TCCTTTTGGATGTTGTAGTCAGAGAGAGTCCGACCATCCTCCAGCTGCTTTCCCGCGAAA 14348 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || || ||||| ||||| || || ||||| |||||||| |||||| || | | Sbjct 14349 ATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTGAATCTTGGACTTGACATTG 14408 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | |||||| || ||||| || | ||| | || ||||| ||||| || || || Sbjct 14409 TCGATTGTGTCGCTGCTCTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACG 14468 Query 114372 AAAATCTGCATGGCT 114386 || |||||||||||| Sbjct 14469 AAGATCTGCATGGCT 14483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420132295520532