Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq401 565 5e-156 seq222 230 4e-55 >seq401 Length=585928 Score = 565 bits (626), Expect = 5e-156 Identities = 1258/1867 (67%), Gaps = 57/1867 (3%) Strand=Plus/Plus Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800 ||||||||| ||| | ||||||||| || | |||||||||||| || |||||||| | Sbjct 360162 TGAACTGGATGGGCTGGGCGGCGGCCTGCGTGCGCAGGTAGTACATTCCCGTCTTGAGAC 360221 Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860 | |||| || || ||||||| ||| | ||| ||| || ||| Sbjct 360222 CCAGCTTCCAGCCGGCGAAGTGCATGCTCGTGATCTTGCCCATGGTGGGCT--------- 360272 Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920 ||| || || ||| || ||||| |||||||| || | |||| || |||| Sbjct 360273 ---CGCGCATGTGGATGTTCAGCGACTGCGACTGGTCGATAAATGCGCCCCGGTCGGCGG 360329 Query 243921 CCATGGTGATGAG-GTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGG 243979 |||| | | || | ||| || ||||| || | |||||||||| | ||||| | Sbjct 360330 CCATCTGCACAATCGTGCG-CTGGGAGATCTCCCACACGGTCTTGTAGAGAGCCTTGATG 360388 Query 243980 TGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGC 244039 | | |||| ||||||||| | ||| || | | | |||| || | | Sbjct 360389 TCGGCCGGGATGTTGGGGATGTTCTGGATCGAACCGCCCTCGGCAATGATGCGGTTCTTC 360448 Query 244040 ATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCACC 244099 ||||| || |||||| |||| | | || ||| | ||| | ||| |||||| Sbjct 360449 ATGTTGTCCGACCACAGACCCATGTCAACGAGATCCTTCAGCAGCCACGGGTTGACCACC 360508 Query 244100 TGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTC 244159 || ||||| |||| |||||| |||||| ||||| |||| || |||||||| || | Sbjct 360509 TGGAACTCGCCCGCCAGCACACGGCGCGAGTAGATGTTGGACGTGTACGGCTCGAAGCAC 360568 Query 244160 TCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTG 244219 || |||||||||| ||||||| ||| ||| ||||||||||| | ||||||||||||| Sbjct 360569 TCGTTGTTGCCCAGAATCTGCGACGTCGACGCTGTCGGCATGGGGGCCACCAGCAGACTG 360628 Query 244220 TTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAG 244279 || | |||||||||| || || || | ||| || ||||||||||| | | || Sbjct 360629 TTGCGCACGCCGTGCTCCTTAATCTTCAGACGCAGCGAGTCCCAGTCCCACAGGTC--AG 360686 Query 244280 AGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTG 244339 | | | || ||| |||||||||| ||||| | |||| ||||| | Sbjct 360687 ACGGCTTCACGT-------CCCACATGTCGGGTTGCAGAATGCCCTGAGACACGGGAGAG 360739 Query 244340 CCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTC-GTCGAGGGC 244398 |||||||| |||| ||||| || ||| || |||||| | || | | ||| || || Sbjct 360740 CCCTCGTACGTCGAGTAGGTGCCCTCGATCTTGGCCAGATCGCACGACGCCGTC-AGAGC 360798 Query 244399 GGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAA 244458 ||||| ||| |||||||| ||||| |||||| | || ||||||| | | ||| Sbjct 360799 GGCGTGGTAAATGGTCTCAAAGATTTGCTTGTTGAGCTCACGGGCCTCGGGCGACTCGAA 360858 Query 244459 GGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCT 244518 ||| |||| || || |||| | || |||||||||||||| || | ||||| || | Sbjct 360859 GGGCATGCGCAGAGCCAAGAAGGCATCCGCCAGTCCCTGCACACCCAGACCGATAGGCCG 360918 Query 244519 GTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTT 244578 || ||| ||||| | | |||| || ||||| ||||| ||||| |||| || || | Sbjct 360919 ATGGCGCATGTTGCTGTTCTTGGCCTCCGGCACAGGGTAGTAGTTGACGTCAATGACGTG 360978 Query 244579 GTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTA 244638 ||| ||||||||| || || | | || ||| ||| || |||||||| || Sbjct 360979 GTTCAGGTTGCGGACGACCAGCTGTGCAACCTCGTGAAGCTTCTTGAAGTCGTAT--GT- 361035 Query 244639 GGGATCCTCGGCGATGGTGATCCTCAC--AAACTCGTTGAGGGCGACGCTGGCCAGGTTG 244696 |||| ||||| | ||| ||| || ||||| | ||||| |||| Sbjct 361036 ------CTCGT---TGGTG-TAGTCAACGAAAGACGGC-AGGGCCAGAGAGGCCAAGTTG 361084 Query 244697 CAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCAC 244756 || || |||||||| || | | | ||||| || ||||| ||||| ||||| || Sbjct 361085 CAAACAGCCACCTCATCTGGGGCAGAGTACTCCACGATCTCCGTGCACAGGTTGGAGCTG 361144 Query 244757 TTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATG 244816 |||||||||||||| || || ||| |||| ||||||| |||||||||||||||| Sbjct 361145 CGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATG 361204 Query 244817 AAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTG 244876 || || || ||||| |||||| |||| | | || |||||| | | |||||| Sbjct 361205 AACGGGTTGCCCGTCTCCGTCTGGGCTTCGAGAATGGCGTACCAGAGCTTCTGGGCCTTG 361264 Query 244877 ACCGTCCTGCGAGCCTTGCCCTCTGC-CTCGTAGCGGGTGTACAGGGCCTCGAACTCGGG 244935 | |||| | ||| || | ||| || ||| || |||||||||||| |||||| Sbjct 361265 ATCGTCTTACGA-CCGCGACCTTCGCGCTCATACTTCTCGTACAGGGCCTCAAACTCGTC 361323 Query 244936 GCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCC 244995 ||| || || | | |||||||||| |||||||| || |||| ||||| Sbjct 361324 GCCATAGCAGTCCGCCATGCCGGGGCACTCGTTGGGGCACATCAGTGTCCAATCGCCATT 361383 Query 244996 GTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGT 245055 | || || | || |||||| || || |||||||||||||| |||| || || | || Sbjct 361384 CTTCTCCACACGCTTCATGAACAGATCAGGGATCCAGAGGGCGAGGAACAGATCGCGGGC 361443 Query 245056 CCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTG 245115 | ||| ||| |||| |||||| | ||| || | ||| |||||||| ||| |||| Sbjct 361444 ACGGATCTCCTCCTTGCCATGGTTCTTGCGCAGATCGAGAAACTCAAAGACATCGGCGTG 361503 Query 245116 CCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCAC-CA 245174 ||| ||||| | ||| | || || ||||| |||||||| || ||||||||||| | Sbjct 361504 CCAAGGCTCAAGGTATATGCAGAAAGCACCGGGGCGCTTGTTTCCGCCCTGGTCCACATA 361563 Query 245175 TCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGG 245234 | | || | |||| ||| || || |||| | |||||||| || |||||| | Sbjct 361564 GCGTGCCGTG-TTGTTGTAGACACGGAGCATAGGGATGATGCCGTTGGATGTGCCGTTTG 361622 Query 245235 TGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT----GCCTAGTCCG 245290 |||| ||||||| ||| | ||| || ||| | ||||||| ||| | ||| Sbjct 361623 TGCCGGCAATGTAGGAGCCAGTAGCCC---GGATGC-GGTGGACATTGAGGCCAATTCCA 361678 Query 245291 CCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTG 245350 ||||| ||||||||| | ||| ||| |||||| |||||| || ||||| |||||| Sbjct 361679 CCGGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGGTGTCGTAGATACCCTCGATGCTG 361738 Query 245351 TCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTG 245410 || |||||||| | || ||||||||||||| ||||| || ||| ||| | |||| Sbjct 361739 TCATCCTTCATGTCCACGAGGAAGCAGGAGGACATCTGGGCCTGTGGGGTGCCGGCGTTG 361798 Query 245411 AACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAGC 245470 || || ||||| ||| || || ||| | | |||| | | | ||| |||| || Sbjct 361799 AAGAGCGTGGGCGAGGCATGCGTGAAGAACTTGTTCGACATGTAGTTGTATGTCTCGACA 361858 Query 245471 AGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCAC-CTCATGAGGGTGTGCTGGGG 245529 | | || | |||||| || ||| || | ||| | ||||| ||||||| || Sbjct 361859 ACACGCTCCACGTTGTCACCCCAGATGCCCACTG-ACACGCGCATGATCATGTGCTGTGG 361917 Query 245530 CGTCTCGATGGGTCCCTCGGGTC-CCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAACC 245588 | |||| || | | || |||||||| |||||| ||||| || |||||||| | Sbjct 361918 CCGTTCGA-CAATCTTGCCGTTCAGCTTGAGCAGGTAGGACCGCTCCAGGGTCTTGAAGC 361976 Query 245589 CAAAGTA 245595 ||||||| Sbjct 361977 CAAAGTA 361983 >seq222 Length=676535 Score = 230 bits (254), Expect = 4e-55 Identities = 368/518 (71%), Gaps = 13/518 (3%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACG 42692 || |||||| ||||||||| |||||||| || || |||||| | | || | | Sbjct 131606 CCTTGCATCCGGAAGAAGGCCGACTGGGCTCTGAAGTGGATCTCGGACCGTGAGTCCTCC 131665 Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 |||| | || | |||| || || ||||||| ||||| || |||||| || || ||| Sbjct 131666 TTCGCCCAGCGCTTGGTCGCTTTCGCCGCCGTTGAGGGTATTTTCTTCAGCGGGGCTTTC 131725 Query 42753 GCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC--GATGCCCGGACTCACCTTCTCGAACG 42810 |||||||||||||| | ||| || ||| | |||||| || || || |||||||||| Sbjct 131726 TCCTCCATCTTCTGGTTGAAGAAG--CGTGGCCTGATGCCTGGCCTGACATTCTCGAACG 131783 Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870 | || || | |||||||| ||||| | |||||||||||||| || |||||| | Sbjct 131784 AGCTTATTTCTCGTGACGAGGGCCTGCACACCGACTTTGCCTGCCTGCTCTTCTCG---C 131840 Query 42871 ACCTCAGGCACAAGCCCTCG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAG 42929 | |||| | || |||| | ||| ||| | || || ||||| || || || || Sbjct 131841 ATCTCAAGAAC-CGCCCGAGCAAGCAGCTGATCGAGGATATCATTGTCGATGCTGTCAAG 131899 Query 42930 ATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGAC 42989 || ||| |||||||||| || || |||| ||| | || ||||||||||| | | Sbjct 131900 ATTGAGCAGGAGTTCCTGACCGAGGCGCTTCCCTGCGCTCTTCTCGGCATGAACTCCACC 131959 Query 42990 CTCATG-TGCAAGTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCA 43047 |||||| |||| ||||| ||| ||| ||||||| || || || | ||| | | Sbjct 131960 CTCATGAAGCAA-TACATTGAGTTCGTTGCCGACCGCCTACTGGTTGCTCTTGGCAATGA 132018 Query 43048 GCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCA 43107 | | ||| | | | |||||||||||| |||||||||||||| ||| |||| Sbjct 132019 -CAAGGTGTACCGCTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCA 132077 Query 43108 AGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 |||||||||| |||||||||||||||| ||||||||| Sbjct 132078 AGACCAACTTCTTCGAGAAGCGCGTCGGTGACTACCAG 132115 Score = 125 bits (138), Expect = 1e-23 Identities = 224/324 (69%), Gaps = 5/324 (2%) Strand=Plus/Plus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368 |||||||||||| || || |||||| |||||||| |||||||| ||||||| Sbjct 131224 ATGTACAAGAAGCACGAGGCTTCGTTCTGGACTGCCGAGGAAATTGACCTCTCCAAGGAT 131283 Query 42369 ACGGCCGGCTGGGAGTCACTGTCTGA--GA--ACGAAAAGTTTTTCCTCAAAAACATACT 42424 | || |||| | || | |||| || | || ||| ||| || |||| || Sbjct 131284 CTGCACGACTGGAACA-ACCGCCTGAACGATGATGAGCGGTTCTTCGTCTCGCACATTCT 131342 Query 42425 GGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAA 42484 ||| ||||| ||||||||||||||||| ||||| |||||||| | | |||| Sbjct 131343 GGCATTCTTTGCCGCCTCTGACGGCATTGTCAACGAGAACCTTGTTGAGCGCTTCAGCGC 131402 Query 42485 AGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGT 42544 ||||| ||| ||||| ||||||||||||||||||||||| || |||||||| Sbjct 131403 CGAGGTTCAGGTGCCAGAGGCTCGCTGCTTCTACGGCTTCCAGATCATGATGGAGAACGT 131462 Query 42545 GCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTAA 42604 ||||| ||| ||| || || || |||| |||||| ||| | | |||| || Sbjct 131463 CCACTCGGAGACTTACTCCCTGCTTATCGACACCTACATCAAGGAGACTGCGCAGCGCAA 131522 Query 42605 CGGGCTGTTCAAGGCCATGGAGAC 42628 | || ||||| ||||| || || Sbjct 131523 CCACCTCTTCAATGCCATCGATAC 131546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944334348457360