Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq365 95.1 1e-14 seq124 86.0 5e-12 seq64 84.2 2e-11 >seq365 Length=144107 Score = 95.1 bits (104), Expect = 1e-14 Identities = 104/136 (76%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || | ||| ||||||||||| || ||||| ||||||||| |||||||| || | Sbjct 47570 CCGCCACGCAGACGCAGCACCAGGTGCAGCGTTGACTCCTTCTGGATGTTGTAGTCCG-A 47628 Query 33961 AATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 || ||| || |||| |||| |||||||| ||||| ||||| |||||||| || ||| Sbjct 47629 AAGTGTGCGTCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCTGGCGG 47688 Query 34020 CACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 47689 GATGCCCTCCTTGTCC 47704 Score = 84.2 bits (92), Expect = 2e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CG 33968 || || ||||||||||| ||||| |||||||||||||||||| || | || || || Sbjct 48035 AGACGGAGCACCAGATGCAGCGTAGACTCCTTCTGAATGTTGTAGTC-GGAAAGCGTCCG 48093 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 | | || || | |||||||| || || || || ||||||||||| || | || ||| Sbjct 48094 CCCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTC 48153 Query 34029 TTTGTCCATAATTTT 34043 ||||||| ||| || Sbjct 48154 TTTGTCCTGAATCTT 48168 Score = 82.4 bits (90), Expect = 6e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || |||||||||| || ||||| ||||||||||||||||| || | || ||| Sbjct 47807 AGACGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGC 47866 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 | || |||| ||||||||| ||||| ||||| |||||||| || ||| | | ||| Sbjct 47867 CCATCCTCCAGTTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCTGGCGGGATACCCTCC 47926 Query 34030 TTGTC 34034 ||||| Sbjct 47927 TTGTC 47931 >seq124 Length=325275 Score = 86.0 bits (94), Expect = 5e-12 Identities = 106/144 (74%), Gaps = 1/144 (1%) Strand=Plus/Plus Query 33892 CAATCGAAACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTG 33951 |||| || ||| || | ||| || |||||||| || || || ||||||||| |||||| Sbjct 289390 CAAT-GATACCACCACGCAGGCGGAGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTG 289448 Query 33952 TAATCTGCCAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGA 34011 || || | || || |||| || | |||||||| ||||| |||||||||||||| Sbjct 289449 TAGTCCGACAGGGTCCGGCCGTCCTCGAGCTGCTTGCCAGCAAAAATCAGGCGCTGCTGG 289508 Query 34012 TCCACCGGCACGCTCTCTTTGTCC 34035 || ||| | || ||| |||||| Sbjct 289509 TCGGGCGGGATGCCCTCCTTGTCC 289532 >seq64 Length=19946 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 ||||| |||||||| || |||||||||||||| || |||||||| || | | || Sbjct 14262 AGCCGAAGCACCAGGTGGAGCGTGCTCTCCTTTTGGATGTTGTAGTCAGAGAGAGTCCGA 14321 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 | || |||| ||||| || || || |||||||||||||| || || | || |||| Sbjct 14322 CCATCCTCCAGCTGCTTTCCCGCGAAAATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCT 14381 Query 34030 TTGTCCATAATTTT 34043 |||||| ||| || Sbjct 14382 TTGTCCTGAATCTT 14395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397060411089622