Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq365 95.1 1e-14
seq124 86.0 5e-12
seq64 84.2 2e-11
>seq365
Length=144107
Score = 95.1 bits (104), Expect = 1e-14
Identities = 104/136 (76%), Gaps = 2/136 (1%)
Strand=Plus/Plus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| || | ||| ||||||||||| || ||||| ||||||||| |||||||| || |
Sbjct 47570 CCGCCACGCAGACGCAGCACCAGGTGCAGCGTTGACTCCTTCTGGATGTTGTAGTCCG-A 47628
Query 33961 AATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019
|| ||| || |||| |||| |||||||| ||||| ||||| |||||||| || |||
Sbjct 47629 AAGTGTGCGTCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCTGGCGG 47688
Query 34020 CACGCTCTCTTTGTCC 34035
| || ||| ||||||
Sbjct 47689 GATGCCCTCCTTGTCC 47704
Score = 84.2 bits (92), Expect = 2e-11
Identities = 101/135 (75%), Gaps = 2/135 (1%)
Strand=Plus/Plus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CG 33968
|| || ||||||||||| ||||| |||||||||||||||||| || | || || ||
Sbjct 48035 AGACGGAGCACCAGATGCAGCGTAGACTCCTTCTGAATGTTGTAGTC-GGAAAGCGTCCG 48093
Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028
| | || || | |||||||| || || || || ||||||||||| || | || |||
Sbjct 48094 CCCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTC 48153
Query 34029 TTTGTCCATAATTTT 34043
||||||| ||| ||
Sbjct 48154 TTTGTCCTGAATCTT 48168
Score = 82.4 bits (90), Expect = 6e-11
Identities = 93/125 (74%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969
|| |||||||||| || ||||| ||||||||||||||||| || | || |||
Sbjct 47807 AGACGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGC 47866
Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029
| || |||| ||||||||| ||||| ||||| |||||||| || ||| | | |||
Sbjct 47867 CCATCCTCCAGTTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCTGGCGGGATACCCTCC 47926
Query 34030 TTGTC 34034
|||||
Sbjct 47927 TTGTC 47931
>seq124
Length=325275
Score = 86.0 bits (94), Expect = 5e-12
Identities = 106/144 (74%), Gaps = 1/144 (1%)
Strand=Plus/Plus
Query 33892 CAATCGAAACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTG 33951
|||| || ||| || | ||| || |||||||| || || || ||||||||| ||||||
Sbjct 289390 CAAT-GATACCACCACGCAGGCGGAGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTG 289448
Query 33952 TAATCTGCCAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGA 34011
|| || | || || |||| || | |||||||| ||||| ||||||||||||||
Sbjct 289449 TAGTCCGACAGGGTCCGGCCGTCCTCGAGCTGCTTGCCAGCAAAAATCAGGCGCTGCTGG 289508
Query 34012 TCCACCGGCACGCTCTCTTTGTCC 34035
|| ||| | || ||| ||||||
Sbjct 289509 TCGGGCGGGATGCCCTCCTTGTCC 289532
>seq64
Length=19946
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969
||||| |||||||| || |||||||||||||| || |||||||| || | | ||
Sbjct 14262 AGCCGAAGCACCAGGTGGAGCGTGCTCTCCTTTTGGATGTTGTAGTCAGAGAGAGTCCGA 14321
Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029
| || |||| ||||| || || || |||||||||||||| || || | || ||||
Sbjct 14322 CCATCCTCCAGCTGCTTTCCCGCGAAAATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCT 14381
Query 34030 TTGTCCATAATTTT 34043
|||||| ||| ||
Sbjct 14382 TTGTCCTGAATCTT 14395
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397060411089622
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |