Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq365 118 3e-21 seq401 100 7e-16 >seq365 Length=144107 Score = 118 bits (130), Expect = 3e-21 Identities = 171/236 (72%), Gaps = 9/236 (4%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||| | || || ||||| | ||| || || || || || |||| Sbjct 48022 CATG-CCACCACGGAGACGGAGCACCAGATGCAGCGTAGACTCCTTCTGAATGTTGTAGT 48080 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| ||||| || || || || | || || || ||||| || |||||||| ||| | Sbjct 48081 CGGAAAGCGTCCGCCCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGA---T 48137 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTC 288417 | ||| || || ||||| ||||| || || ||| || ||||| || || | || | Sbjct 48138 CGGGGGGAATGCCCTCTTTGTCCTGAATCTT-GCTCTTGACGTTGTCGATCGTGTCCGAC 48196 Query 288418 GATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || ||||||||||| || |||||||||||||| || |||||||| Sbjct 48197 GACTCGACCTCAAGAGTGATCGTCTTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 48252 Score = 113 bits (124), Expect = 1e-19 Identities = 142/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | || ||||||||||| || | || || || || ||| Sbjct 47606 TCCTTCTGGATGTTGTAGTCCGAAAGTGTGCGTCCGTCCTCCAGCTGCTTGCCAGCAAAG 47665 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| ||||| || ||| ||||| || || || |||||||| |||| || || Sbjct 47666 ATCAGCCGCTGCTG---GTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACA 47722 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| || || || || ||||| |||||||| || |||| |||||| Sbjct 47723 TTGTCAATCGTATCCGAGGACTCCACCTCAAGCGTAATCGTCTTTCCTGTCAACGTCTTG 47782 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 47783 ACGAAGATCTGCAT 47796 Score = 96.9 bits (106), Expect = 8e-15 Identities = 164/235 (70%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || ||||| || | || || | || | ||| ||| || || || || |||| Sbjct 47794 CATG-CCGCCGCGAAGACGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGT 47852 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | | || ||||| || || || | ||| || ||||| |||||||||||||| || | Sbjct 47853 CCGACAGGGTGCGCCCATCCTCCAGTTGCTTGCCTGCAAAGATCAGACGCTGCTG---GT 47909 Query 288362 CT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 || ||||| || || || || ||||| || | ||||| || || || | || || Sbjct 47910 CTGGCGGGATACCCTCCTTGTCTTGGATCTTTGACTTCACATTGTCAATCGTGTCTGACG 47969 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || | ||| |||||||| || || || ||||| || || |||||||| Sbjct 47970 ACTCCACCTCCAACGTAATCGTCTTGCCCGTGAGCGTCTTCACAAAGATCTGCAT 48024 >seq401 Length=585928 Score = 100 bits (110), Expect = 7e-16 Identities = 236/346 (68%), Gaps = 8/346 (2%) Strand=Plus/Plus Query 326033 AAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCATGATCATC 326092 ||||| |||| ||||| || ||| | ||||| ||| || | |||||||||| Sbjct 158072 AAGTTGATGAGAAGACCCTTGATATGACTACCGTCGTGATCTTGATCCGCCATGATCATC 158131 Query 326093 ACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGAAGGCCGAGA 326152 | ||| |||||||| || ||||| | ||||| | | | |||||||| Sbjct 158132 AGATGTCCGTAACGCAGGCTCTTGGTGTCGGTATACACCTGCTTGTGCTTCAGGCCGAGG 158191 Query 326153 ATTTGTTTGAGCGCTGTG-ATTTCTTCGTTCTTCGTGATGCTTG-CCACGGATGCATCGC 326210 | || |||| | | || || || | |||||| ||||| || | | | ||| ||||||| Sbjct 158192 AACTGCTTGA-TGTTTTGAATCTCCTTGTTCTTGGTGAT-CTGGTCGATGGACGCATCGC 158249 Query 326211 GGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCC-ATATCTCTCGCGACCGACCACG 326269 | |||||||| ||||| ||||| |||||||| || || ||| | || || | | ||| Sbjct 158250 GCACGTTCAAAAGTTTACCACGCAGAGGGAAGACACCGATA-CGGTCAGGATCTAGAACG 158308 Query 326270 GACAGCCCTGCGATTGC-AAGTGTCGCTGCGGAATCCCCCTCCGTCAGAATGAGAGTGCA 326328 | | || || || || ||| || |||||||| ||||| ||||| || |||||||| Sbjct 158309 GCACGACCGGCAATGGCTAAGCCACG-GGCGGAATCACCCTCTGTCAGGATCAGAGTGCA 158367 Query 326329 CATTTTGCTGTTATTCGTTCCAGCCCATGTAGCATCGTTGAGTTTG 326374 | | || | || ||||| ||| | |||||||| ||| ||| Sbjct 158368 CTCGTGGCCATGCTTGGTTCCGGCCAAGTTAGCATCGACGAGCTTG 158413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179648188013658