Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq365 118 3e-21
seq401 100 7e-16
>seq365
Length=144107
Score = 118 bits (130), Expect = 3e-21
Identities = 171/236 (72%), Gaps = 9/236 (4%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| ||||| | || || ||||| | ||| || || || || || ||||
Sbjct 48022 CATG-CCACCACGGAGACGGAGCACCAGATGCAGCGTAGACTCCTTCTGAATGTTGTAGT 48080
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| ||||| || || || || | || || || ||||| || |||||||| ||| |
Sbjct 48081 CGGAAAGCGTCCGCCCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGA---T 48137
Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTC 288417
| ||| || || ||||| ||||| || || ||| || ||||| || || | || |
Sbjct 48138 CGGGGGGAATGCCCTCTTTGTCCTGAATCTT-GCTCTTGACGTTGTCGATCGTGTCCGAC 48196
Query 288418 GATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || || ||||||||||| || |||||||||||||| || ||||||||
Sbjct 48197 GACTCGACCTCAAGAGTGATCGTCTTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 48252
Score = 113 bits (124), Expect = 1e-19
Identities = 142/194 (73%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||| | || ||||||||||| || | || || || || |||
Sbjct 47606 TCCTTCTGGATGTTGTAGTCCGAAAGTGTGCGTCCGTCCTCCAGCTGCTTGCCAGCAAAG 47665
Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||| ||||| || ||| ||||| || || || |||||||| |||| || ||
Sbjct 47666 ATCAGCCGCTGCTG---GTCTGGCGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACA 47722
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | ||| || || || || ||||| |||||||| || |||| ||||||
Sbjct 47723 TTGTCAATCGTATCCGAGGACTCCACCTCAAGCGTAATCGTCTTTCCTGTCAACGTCTTG 47782
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 47783 ACGAAGATCTGCAT 47796
Score = 96.9 bits (106), Expect = 8e-15
Identities = 164/235 (70%), Gaps = 7/235 (3%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| || ||||| || | || || | || | ||| ||| || || || || ||||
Sbjct 47794 CATG-CCGCCGCGAAGACGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGT 47852
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| | || ||||| || || || | ||| || ||||| |||||||||||||| || |
Sbjct 47853 CCGACAGGGTGCGCCCATCCTCCAGTTGCTTGCCTGCAAAGATCAGACGCTGCTG---GT 47909
Query 288362 CT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418
|| ||||| || || || || ||||| || | ||||| || || || | || ||
Sbjct 47910 CTGGCGGGATACCCTCCTTGTCTTGGATCTTTGACTTCACATTGTCAATCGTGTCTGACG 47969
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| || || || | ||| |||||||| || || || ||||| || || ||||||||
Sbjct 47970 ACTCCACCTCCAACGTAATCGTCTTGCCCGTGAGCGTCTTCACAAAGATCTGCAT 48024
>seq401
Length=585928
Score = 100 bits (110), Expect = 7e-16
Identities = 236/346 (68%), Gaps = 8/346 (2%)
Strand=Plus/Plus
Query 326033 AAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCATGATCATC 326092
||||| |||| ||||| || ||| | ||||| ||| || | ||||||||||
Sbjct 158072 AAGTTGATGAGAAGACCCTTGATATGACTACCGTCGTGATCTTGATCCGCCATGATCATC 158131
Query 326093 ACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGAAGGCCGAGA 326152
| ||| |||||||| || ||||| | ||||| | | | ||||||||
Sbjct 158132 AGATGTCCGTAACGCAGGCTCTTGGTGTCGGTATACACCTGCTTGTGCTTCAGGCCGAGG 158191
Query 326153 ATTTGTTTGAGCGCTGTG-ATTTCTTCGTTCTTCGTGATGCTTG-CCACGGATGCATCGC 326210
| || |||| | | || || || | |||||| ||||| || | | | ||| |||||||
Sbjct 158192 AACTGCTTGA-TGTTTTGAATCTCCTTGTTCTTGGTGAT-CTGGTCGATGGACGCATCGC 158249
Query 326211 GGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCC-ATATCTCTCGCGACCGACCACG 326269
| |||||||| ||||| ||||| |||||||| || || ||| | || || | | |||
Sbjct 158250 GCACGTTCAAAAGTTTACCACGCAGAGGGAAGACACCGATA-CGGTCAGGATCTAGAACG 158308
Query 326270 GACAGCCCTGCGATTGC-AAGTGTCGCTGCGGAATCCCCCTCCGTCAGAATGAGAGTGCA 326328
| | || || || || ||| || |||||||| ||||| ||||| || ||||||||
Sbjct 158309 GCACGACCGGCAATGGCTAAGCCACG-GGCGGAATCACCCTCTGTCAGGATCAGAGTGCA 158367
Query 326329 CATTTTGCTGTTATTCGTTCCAGCCCATGTAGCATCGTTGAGTTTG 326374
| | || | || ||||| ||| | |||||||| ||| |||
Sbjct 158368 CTCGTGGCCATGCTTGGTTCCGGCCAAGTTAGCATCGACGAGCTTG 158413
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179648188013658
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |