Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq222 109 1e-18 seq401 95.1 3e-14 seq68 87.8 4e-12 >seq222 Length=676535 Score = 109 bits (120), Expect = 1e-18 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 243530 AGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGG 243589 |||| ||| | ||| || |||| ||| ||| | ||||||||||| |||||| Sbjct 131907 AGGAGTTCCTGACCGAGGCGCTTCCCTGCGCTCTTCTCGGCATGAACTCCACCCTCATGA 131966 Query 243590 GACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGT 243649 || ||||| || ||||| ||||||||| | | | || ||||| |||| || |||| Sbjct 131967 AGCAATACATTGAGTTCGTTGCCGACCGCCTACTGGTTGCTCTTGGCAATGACAAGGTGT 132026 Query 243650 ACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACT 243709 || ||||| |||||||| | ||| |||||| ||| || || || || || |||| Sbjct 132027 ACCGCTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACT 132086 Query 243710 TCTTCGAAAAGCGTGTCAGTGATTATCA 243737 ||||||| ||||| ||| |||| || || Sbjct 132087 TCTTCGAGAAGCGCGTCGGTGACTACCA 132114 >seq401 Length=585928 Score = 95.1 bits (104), Expect = 3e-14 Identities = 235/346 (68%), Gaps = 8/346 (2%) Strand=Plus/Plus Query 298154 AAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCATGATCATC 298213 ||||| |||| ||||| || ||| | ||||| ||| || | |||||||||| Sbjct 158072 AAGTTGATGAGAAGACCCTTGATATGACTACCGTCGTGATCTTGATCCGCCATGATCATC 158131 Query 298214 ACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGAAGGCCGAGA 298273 | ||| |||||||| || ||||| | ||||| | | | |||||||| Sbjct 158132 AGATGTCCGTAACGCAGGCTCTTGGTGTCGGTATACACCTGCTTGTGCTTCAGGCCGAGG 158191 Query 298274 ATTTGTTTGAGCGCTGTG-ATTTCTTCGTTCTTCGTGATGCTTG-CCACGGATGCATCGC 298331 | || |||| | | || || || | |||||| ||||| || | | | ||| ||||||| Sbjct 158192 AACTGCTTGA-TGTTTTGAATCTCCTTGTTCTTGGTGAT-CTGGTCGATGGACGCATCGC 158249 Query 298332 GGACATTCAATAGTTTTCCACGAAGAGGGAACACTCC-ATATCTCTCGCGACCGACCACG 298390 | || ||||| ||||| ||||| |||||||| || || ||| | || || | | ||| Sbjct 158250 GCACGTTCAAAAGTTTACCACGCAGAGGGAAGACACCGATA-CGGTCAGGATCTAGAACG 158308 Query 298391 GACAGCCCTGCGATTGC-AAGTGTCGCTGCGGAATCCCCCTCCGTCAGAATGAGAGTGCA 298449 | | || || || || ||| || |||||||| ||||| ||||| || |||||||| Sbjct 158309 GCACGACCGGCAATGGCTAAGCCACG-GGCGGAATCACCCTCTGTCAGGATCAGAGTGCA 158367 Query 298450 CATTTTGCTGTTATTCGTTCCAGCCCATGTAGCATCGTTGAGTTTG 298495 | | || | || ||||| ||| | |||||||| ||| ||| Sbjct 158368 CTCGTGGCCATGCTTGGTTCCGGCCAAGTTAGCATCGACGAGCTTG 158413 >seq68 Length=355481 Score = 87.8 bits (96), Expect = 4e-12 Identities = 256/386 (66%), Gaps = 14/386 (4%) Strand=Plus/Plus Query 333615 ATGATGGCACGGTCCTTCGAAGTGATACCCTCGAGGAACCCGGGCTCGGGGAACTTCCAC 333674 ||||| || ||| || ||| ||||||| |||| |||||| |||||||| || Sbjct 267008 ATGATAGCCCGGGTCTGCGACTTGATACCGGACAGGAGGCCGGGCGGCGGGAACTTGAAC 267067 Query 333675 GTGGTCTTCGTCTCG--GTAAGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGA 333732 || | | | || | || |||| |||||| ||| | ||||| | | || || | Sbjct 267068 -TGCACCT-GACTGGCCGTCAGGGTGTAGTAGCTCTTCGCCTCGGGGTGGTGGTTGACAA 267125 Query 333733 ACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAG 333792 || || || || |||||||| | ||||| | ||| ||||| ||| || Sbjct 267126 ACGTGGCAAGGTTGCCCTTGTAGTGGGCTAGCTTCTTGCCAGGCTCGTAGTGGTAGATGT 267185 Query 333793 AGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCT 333852 ||| || |||||||||| ||||||||||| || ||||||| || | |||||| Sbjct 267186 CCGTGGTGACCTCGTCGAGGAAGCCGGAGTCGTGAGAAACAATCAAGCTGGTCACGTCC- 267244 Query 333853 TAAGGT---TGATCAGGTA-TTCAATC-AGCCACCTCACGTTAGACACAGAAAGATGGTT 333907 |||| | | ||||| ||| || ||||| || | ||| | ||| | || || Sbjct 267245 --AGGTGTGTCTTGAGGTAGTTC--TCGAGCCATCTGATGTTTGCAACATCCAAGTGATT 267300 Query 333908 GGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAG 333967 ||||| ||||| || || || | | || || | | ||| ||||| || ||||| || Sbjct 267301 CGTCGGTTCGTCCAGCAGGAGGACGTCCGCCTTTTGCAACATGGCACGGGCCAGAGCCAG 267360 Query 333968 TTTCATTTTCCACCCTCCTGAAAGAG 333993 ||||| |||||||| || || |||| Sbjct 267361 CTTCATCTTCCACCCACCAGACAGAG 267386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102874192302850