Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq222 109 1e-18
seq401 95.1 3e-14
seq68 87.8 4e-12
>seq222
Length=676535
Score = 109 bits (120), Expect = 1e-18
Identities = 149/208 (72%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 243530 AGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGG 243589
|||| ||| | ||| || |||| ||| ||| | ||||||||||| ||||||
Sbjct 131907 AGGAGTTCCTGACCGAGGCGCTTCCCTGCGCTCTTCTCGGCATGAACTCCACCCTCATGA 131966
Query 243590 GACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGT 243649
|| ||||| || ||||| ||||||||| | | | || ||||| |||| || ||||
Sbjct 131967 AGCAATACATTGAGTTCGTTGCCGACCGCCTACTGGTTGCTCTTGGCAATGACAAGGTGT 132026
Query 243650 ACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACT 243709
|| ||||| |||||||| | ||| |||||| ||| || || || || || ||||
Sbjct 132027 ACCGCTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACT 132086
Query 243710 TCTTCGAAAAGCGTGTCAGTGATTATCA 243737
||||||| ||||| ||| |||| || ||
Sbjct 132087 TCTTCGAGAAGCGCGTCGGTGACTACCA 132114
>seq401
Length=585928
Score = 95.1 bits (104), Expect = 3e-14
Identities = 235/346 (68%), Gaps = 8/346 (2%)
Strand=Plus/Plus
Query 298154 AAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCATGATCATC 298213
||||| |||| ||||| || ||| | ||||| ||| || | ||||||||||
Sbjct 158072 AAGTTGATGAGAAGACCCTTGATATGACTACCGTCGTGATCTTGATCCGCCATGATCATC 158131
Query 298214 ACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGAAGGCCGAGA 298273
| ||| |||||||| || ||||| | ||||| | | | ||||||||
Sbjct 158132 AGATGTCCGTAACGCAGGCTCTTGGTGTCGGTATACACCTGCTTGTGCTTCAGGCCGAGG 158191
Query 298274 ATTTGTTTGAGCGCTGTG-ATTTCTTCGTTCTTCGTGATGCTTG-CCACGGATGCATCGC 298331
| || |||| | | || || || | |||||| ||||| || | | | ||| |||||||
Sbjct 158192 AACTGCTTGA-TGTTTTGAATCTCCTTGTTCTTGGTGAT-CTGGTCGATGGACGCATCGC 158249
Query 298332 GGACATTCAATAGTTTTCCACGAAGAGGGAACACTCC-ATATCTCTCGCGACCGACCACG 298390
| || ||||| ||||| ||||| |||||||| || || ||| | || || | | |||
Sbjct 158250 GCACGTTCAAAAGTTTACCACGCAGAGGGAAGACACCGATA-CGGTCAGGATCTAGAACG 158308
Query 298391 GACAGCCCTGCGATTGC-AAGTGTCGCTGCGGAATCCCCCTCCGTCAGAATGAGAGTGCA 298449
| | || || || || ||| || |||||||| ||||| ||||| || ||||||||
Sbjct 158309 GCACGACCGGCAATGGCTAAGCCACG-GGCGGAATCACCCTCTGTCAGGATCAGAGTGCA 158367
Query 298450 CATTTTGCTGTTATTCGTTCCAGCCCATGTAGCATCGTTGAGTTTG 298495
| | || | || ||||| ||| | |||||||| ||| |||
Sbjct 158368 CTCGTGGCCATGCTTGGTTCCGGCCAAGTTAGCATCGACGAGCTTG 158413
>seq68
Length=355481
Score = 87.8 bits (96), Expect = 4e-12
Identities = 256/386 (66%), Gaps = 14/386 (4%)
Strand=Plus/Plus
Query 333615 ATGATGGCACGGTCCTTCGAAGTGATACCCTCGAGGAACCCGGGCTCGGGGAACTTCCAC 333674
||||| || ||| || ||| ||||||| |||| |||||| |||||||| ||
Sbjct 267008 ATGATAGCCCGGGTCTGCGACTTGATACCGGACAGGAGGCCGGGCGGCGGGAACTTGAAC 267067
Query 333675 GTGGTCTTCGTCTCG--GTAAGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGA 333732
|| | | | || | || |||| |||||| ||| | ||||| | | || || |
Sbjct 267068 -TGCACCT-GACTGGCCGTCAGGGTGTAGTAGCTCTTCGCCTCGGGGTGGTGGTTGACAA 267125
Query 333733 ACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAG 333792
|| || || || |||||||| | ||||| | ||| ||||| ||| ||
Sbjct 267126 ACGTGGCAAGGTTGCCCTTGTAGTGGGCTAGCTTCTTGCCAGGCTCGTAGTGGTAGATGT 267185
Query 333793 AGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCT 333852
||| || |||||||||| ||||||||||| || ||||||| || | ||||||
Sbjct 267186 CCGTGGTGACCTCGTCGAGGAAGCCGGAGTCGTGAGAAACAATCAAGCTGGTCACGTCC- 267244
Query 333853 TAAGGT---TGATCAGGTA-TTCAATC-AGCCACCTCACGTTAGACACAGAAAGATGGTT 333907
|||| | | ||||| ||| || ||||| || | ||| | ||| | || ||
Sbjct 267245 --AGGTGTGTCTTGAGGTAGTTC--TCGAGCCATCTGATGTTTGCAACATCCAAGTGATT 267300
Query 333908 GGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAG 333967
||||| ||||| || || || | | || || | | ||| ||||| || ||||| ||
Sbjct 267301 CGTCGGTTCGTCCAGCAGGAGGACGTCCGCCTTTTGCAACATGGCACGGGCCAGAGCCAG 267360
Query 333968 TTTCATTTTCCACCCTCCTGAAAGAG 333993
||||| |||||||| || || ||||
Sbjct 267361 CTTCATCTTCCACCCACCAGACAGAG 267386
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102874192302850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |