Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq222 87.8 2e-12 seq401 86.0 7e-12 >seq222 Length=676535 Score = 87.8 bits (96), Expect = 2e-12 Identities = 155/225 (69%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| || ||||||||||| || || || || |||||||| ||| || Sbjct 131824 GGCAAAGTCGGTGTGCAGGCCCTCGTCACGAGAAATAAGCTCGTTCGAGAATGTCAGGCC 131765 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||| || || ||||||||||||||||| || | | || | || |||||| || Sbjct 131764 AGGCATCAGGCCACGCTTCTTCAACCAGAAGATGGAGGAGAAAGCCCCGCTGAAGAAAAT 131705 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC--- 126222 ||||| || ||||| || | | |||| || |||||| |||| ||| Sbjct 131704 ACCCTCAACGGCGGCGAAAGCGACCAAGCGCTGGGCGAAGGAG---GACTCACGGTCCGA 131648 Query 126223 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGAC 126267 | |||||||| ||||| | ||||| ||| ||| || || || Sbjct 131647 GATCCACTTCAGAGCCCAGTCGGCCTTCTTCCGGATGCAAGGAAC 131603 >seq401 Length=585928 Score = 86.0 bits (94), Expect = 7e-12 Identities = 124/173 (72%), Gaps = 4/173 (2%) Strand=Plus/Plus Query 173635 CATATTGTTGTTCCATTTCTGTGTGTAACACTGCTTTGTCTCCCCA--TCCTTGATCACG 173692 ||| ||||||| |||| |||| |||| | || || || || |||| | | || Sbjct 159160 CATGTTGTTGTGCCATGTCTGCTTGTAGCGCT--TTCCGCTGGCCGAGTCCTGGCACTCG 159217 Query 173693 ATGGAAAACTCCGAAGAATAGATGTTCGTCAACTTGGCACCGTAGCCATTGCGTCCACCA 173752 | | ||||| | ||| ||| ||| || ||| |||||||| || || || |||||| Sbjct 159218 ACTGTGAACTCAGTCGAAAAGACGTTACACAGCTTCGCACCGTAACCGTTTCGGCCACCA 159277 Query 173753 ACAATTCTCTTCTTGTTGTCATCGTAGTTTGTACTCGTGAGGAGGTGACCAAA 173805 || ||||||||| |||||| |||||||| | || ||||||||||| || || Sbjct 159278 ACGGTTCTCTTCTCGTTGTCGTCGTAGTTGGAACCGGTGAGGAGGTGGCCGAA 159330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597350531095880