Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq365 111 2e-19
seq64 95.1 1e-14
seq124 93.3 4e-14
seq401 84.2 2e-11
>seq365
Length=144107
Score = 111 bits (122), Expect = 2e-19
Identities = 154/214 (72%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| ||||| | ||| || || || ||||||||||| || | | || ||| | ||
Sbjct 48041 AGCACCAGATGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGGAAAGCGTCCGCCCATCC 48100
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|||||||||||||| || ||||||| |||||||| ||||| ||||| || ||||| ||
Sbjct 48101 TCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCTTTGTCC 48160
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGG 64409
|| || || ||| || || | || | ||| || || || || | ||| | |
Sbjct 48161 TGAATCTTGCTCTTGACGTTGTCGATCGTGT--CCGACGACTCGACCTCAAGAGTGATCG 48218
Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||||| |||| ||| || || || || |||||
Sbjct 48219 TCTTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 48252
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
||||| |||| | ||||| || || | ||| || || || || |||||||| || |
Sbjct 47570 CCGCCACGCAGACGCAGCACCAGGTGCAGCGTTGACTCCTTCTGGATGTTGTAGTCCGAA 47629
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| ||||| |||| || ||||||||||| ||| | || |||||||||||||| || ||
Sbjct 47630 AGTGTGCGTCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCTGGCGGG 47689
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|| || || || || || || || ||| ||| || | ||||| || |||||
Sbjct 47690 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATCGTATCCGAGGACTCCACC 47749
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | ||||| || ||||| || || ||||| || |||||
Sbjct 47750 TCAAGCGTAATCGTCTTTCCTGTCAACGTCTTGACGAAGATCTGCAT 47796
Score = 107 bits (118), Expect = 2e-18
Identities = 163/230 (71%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | || || || || | |||||| || || || ||||||||||| |
Sbjct 48253 ACCACCACGCAGACGCAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGA 48312
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || || |||| || ||||||||||| || ||||||| |||||||| ||||| ||
Sbjct 48313 TAGCGTCCGACCGTCCTCGAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGATCGGGGGG 48372
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCC 64393
||| || ||||| || || || || ||| || || | || | ||| || ||
Sbjct 48373 AATGCCCTCTTTGTCCTGAATCTTGCTCTTGACGTTGTCTATCGTGT--CCGACGATTCA 48430
Query 64394 ACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| |||| || | |||||||||||| | ||||| || || || |||||
Sbjct 48431 ACCTCTAGTGTGATGGTCTTGCCGGTAAGCGTTTTGACAAAGATCTGCAT 48480
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|||||||| | | ||||| | || | ||||||||| || ||||||||||| || |
Sbjct 47798 CCGCCGCGAAGACGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCCGAC 47857
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| ||||||| | || || || |||||||| ||| | || || ||||||||||| || ||
Sbjct 47858 AGGGTGCGCCCATCCTCCAGTTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCTGGCGGG 47917
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|| || || || ||||| || ||| ||| ||| || | || || | |||||
Sbjct 47918 ATACCCTCCTTGTCTTGGATCTTTGACTTCACATTGTCAATCGTGTCTGACGACTCCACC 47977
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||||| || | || || || || || |||||
Sbjct 47978 TCCAACGTAATCGTCTTGCCCGTGAGCGTCTTCACAAAGATCTGCAT 48024
>seq64
Length=19946
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
||||| || | | |||||| || || | ||| || ||||| |||||||| || | |
Sbjct 14253 CCGCCACGGAGCCGAAGCACCAGGTGGAGCGTGCTCTCCTTTTGGATGTTGTAGTCAGAG 14312
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| || || | || || |||||||| || || |||| || ||||||||||| || ||
Sbjct 14313 AGAGTCCGACCATCCTCCAGCTGCTTTCCCGCGAAAATCAGGCGCTGCTGGTCAGGGGGG 14372
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|| || ||||| || || || || ||| ||| || | ||| || | | || ||
Sbjct 14373 ATGCCCTCTTTGTCCTGAATCTTGGACTTGACATTGTCGATTGTGTCGCTGCTCTCGACC 14432
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | ||||||||| |||| || || ||||| || |||||
Sbjct 14433 TCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 14479
>seq124
Length=325275
Score = 93.3 bits (102), Expect = 4e-14
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | ||||| || || | ||||| || || || |||||||| || |
Sbjct 289397 ACCACCACGCAGGCGGAGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 289456
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||| || |||| || ||||||||||| ||| |||| || |||||||||||||| ||
Sbjct 289457 CAGGGTCCGGCCGTCCTCGAGCTGCTTGCCAGCAAAAATCAGGCGCTGCTGGTCGGGCGG 289516
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || || || || || || || ||| ||| || | || || || || ||
Sbjct 289517 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGAC 289576
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAA 64434
|| | || | ||||||||| || | || || |||||
Sbjct 289577 CTCCAAGGTGATGGTCTTGCCCGTAAGGGTCTTCACGAA 289615
>seq401
Length=585928
Score = 84.2 bits (92), Expect = 2e-11
Identities = 249/378 (66%), Gaps = 6/378 (2%)
Strand=Plus/Plus
Query 154583 CACAGACGCCAAGTTGCAAACGGCAATTTCTTCAGAACTACTGTATTGCACAATTTCTGC 154642
|| ||| |||||||||||||| || | || || | | ||| | ||| || || |
Sbjct 361069 CAGAGAGGCCAAGTTGCAAACAGCCACCTCATCTGGGGCAGAGTACTCCACGATCTCCGT 361128
Query 154643 GCACAAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGC 154702
||||| || || || |||||||||||||| ||||| || ||| ||||||
Sbjct 361129 GCACAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTG 361188
Query 154703 GTCTTTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAATAATTGTGCGAAA 154762
||| ||||| | ||| ||||| ||||||| ||| |||| ||| | ||| ||| |
Sbjct 361189 GTCCTTGTAGAGCATGAACGGGTTGCCCGTCTCCGTCTGGGCTTCGAGAAT--GGCGTAC 361246
Query 154763 CAGA-CTTC-GCGCCTCAACTTGAC-AAGTAAATCGATTTTCGCTCTCATATTGTTCGTA 154819
|||| |||| | |||| | | | | | | ||| ||||| |||||| | |||||
Sbjct 361247 CAGAGCTTCTGGGCCTTGA-TCGTCTTACGACCGCGACCTTCGCGCTCATACTTCTCGTA 361305
Query 154820 CAGTTTTTCAAACTCTAAACTGTACACGTCCGACAAACCGGGACAGCGGTCGGGACACAT 154879
||| |||||||| | || ||||| || ||||| || || ||| |||||
Sbjct 361306 CAGGGCCTCAAACTCGTCGCCATAGCAGTCCGCCATGCCGGGGCACTCGTTGGGGCACAT 361365
Query 154880 CAATGACCACATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGCACCCACAAAGC 154939
|| || ||| | || | | || || ||||| |||| ||| || | ||| | ||
Sbjct 361366 CAGTGTCCAATCGCCATTCTTCTCCACACGCTTCATGAACAGATCAGGGATCCAGAGGGC 361425
Query 154940 GTACAACAAATCACGCGC 154957
| |||| ||| || ||
Sbjct 361426 GAGGAACAGATCGCGGGC 361443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499642233074840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |