Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq401 408 4e-109 >seq401 Length=585928 Score = 408 bits (452), Expect = 4e-109 Identities = 1109/1672 (66%), Gaps = 38/1672 (2%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 |||||| | ||||||| |||||| || |||||| ||| ||||| |||||| || | ||| Sbjct 361992 AATTACCAATACTTTGGCTTCAAGACCCTGGAGCGGTCCTACCTGCTCAAGCTGAACGGC 361933 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | || ||| || || || || || | |||||||| | | || || || || Sbjct 361932 AAGATTGTCGAACGGCCACAGCACATGATCATGCGCGTGTCAGTGGGCATCTGGGGTGAC 361873 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893 || || | |||| | | | | || ||||| | ||||| | || |||| | Sbjct 361872 AACGTGGAGCGTGTTGTCGAGACATACAACTACATGTCGAACAAGTTCTTCACGCATG-C 361814 Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953 | | || || || |||||||| || ||||| | | |||||||| || || ||||| | Sbjct 361813 CTCGCCCACGCTCTTCAACGCCGGCACCCCACAGGCCCAGATGTCCTCCTGCTTCCTCGT 361754 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 | | |||| ||| |||| || || | ||||| ||||||| |||||| | || Sbjct 361753 GGACATGAAGGATGACAGCATCGAGGGTATCTACGACACCCTCAAGACCTGTGCCATGAT 361694 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 ||| || || || ||||| || ||| ||||||| | | || || | || ||||| Sbjct 361693 CTCCAAGACGGCCGGTGGAATTGGCCTCAATGTCCACCGCATCCGGGCTACTGGCTCCTA 361634 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 ||| ||| || || ||||| ||||||||| || ||||||||||||| |||| |||||| Sbjct 361633 CATTGCCGGCACAAACGGCACATCCAACGGCATCATCCCTATGCTCCGTGTCTACAACAA 361574 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | |||| ||||| ||||||||||| || | | | ||| ||||| | || || Sbjct 361573 CACGGCACGCTATGTGGACCAGGGCGGAAACAAGCGCCCCGGTGCTTTCTGCATATACCT 361514 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 ||||| |||||||| || || | || |||| ||||| |||||||| ||||| || Sbjct 361513 TGAGCCTTGGCACGCCGATGTCTTTGAGTTTCTCGATCTGCGCAAGAACCATGGCAAGGA 361454 Query 94254 TCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 ||||| | ||| | || || ||| ||| |||||| | || || || || ||||| Sbjct 361453 ---GGAGATCCGTGCCCGCGATCTGTTCCTCGCCCTCTGGATCCCTGATCTGTTCATGAA 361397 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTC 94370 || || ||||| || || |||| || | || ||||| || || ||||| || | Sbjct 361396 GCGTGTGGAGAAGAATGGCGATTGGACACTGATGTGCCCCAACGAGTGCCCCGGCATGGC 361337 Query 94371 CGACGTTTGTGG-ATCGCGTTTTGAAGACTTGTATGCTCGTTACGA-ATCGCAGGGCAAG 94428 ||| | ||| || | ||||| | | |||| | || || || ||| | | Sbjct 361336 GGACTGCTATGGCGACGAG-TTTGAGGCCCTGTACGAGAAGTATGAGCGCGAAGGTCGCG 361278 Query 94429 GCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAG 94488 | | | ||| || | || |||||| ||| | || | || | ||| |||| Sbjct 361277 GTC-GTAAGACGATCAAGGCCCAGAAGCTCTGGTACGCCATTCTCGAAGCCCAGACGGAG 361219 Query 94489 ACGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547 ||||| | || | ||| | | |||||| | ||| |||| |||| ||||||| || | Sbjct 361218 ACGGGCAACCCGTTCATGCTCTACAAGGACCACTG-CAACCGCAAGAGCAACCAGAAGAA 361160 Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607 ||| || ||| ||||| || |||||||| ||||| || ||||| || | || || Sbjct 361159 CCTGGGCACCATCCGCAGCTCCAACCTGTGCACGGAGATCGTGGAGTACTCTGCCCCAGA 361100 Query 94608 CGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTA 94667 ||| | ||||| || ||| ||| ||| | |||| | ||||||| || ||| Sbjct 361099 TGAGGTGGCTGTTTGCAACTTGGCCTCTCTGGCCCTGCCGTCTTTCGT------TGACTA 361046 Query 94668 CACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT 94727 ||| | || | | | ||| | || ||||| || | | | | ||||| | Sbjct 361045 CAC--CAAC-GAGACATACGACTTCAAGAAGCTT---CACGAGGTTGCACAGCTGGTCGT 360992 Query 94728 ---GAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTC 94784 ||||||||| || || ||| |||| |||||| || |||||||| ||||| Sbjct 360991 CCGCAACCTGAACCACGTCATTGACGTCAACTACTACCCTGTGCCGGAGGCCAAGAACAG 360932 Query 94785 AAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGAT 94844 ||| || |||||||| ||||| | || || ||||| | ||||| || | || Sbjct 360931 CAACATGCGCCATCGGCCTATCGGTCTGGGTGTGCAGGGACTGGCGGATGCCTTCTTGGC 360872 Query 94845 GATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAG 94904 |||| |||||| ||| || ||| || | | || | | || || || | Sbjct 360871 TCTGCGCATGCCCTTCGAGTCGCCCGAGGCCCGTGAGCTCAACAAGCAAATCTTTGAGAC 360812 Query 94905 CATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCC-AGATCGGACGGCGGGCCAC 94963 |||||| ||| || ||| || | | ||||| ||||| || ||| | || Sbjct 360811 CATTTACCACGCCGCTCTGACGGCGTCGTGCGATCTGGCCAAGATC-GAGGGC-ACCTAC 360754 Query 94964 ACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTG 95023 ||| ||| | || || ||| || ||||||||| | || |||| | |||| | Sbjct 360753 TCGA--CGTACGAGGGCTCTCCCGTGTCTCAGGGCATTCTGCAACCCGACATGTGGGACG 360696 Query 95024 TGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATG-TTATCAAACACGGT 95082 ||||||| || | |||| |||||||| | || || |||| | ||| | ||||| Sbjct 360695 TGAAGCCGTCTGACCTGTGGGACTGGGACTCGCTGCG-TCTGAAGATTAAGGAGCACGGC 360637 Query 95083 GTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGC 95142 ||| ||| ||||| |||||||||||||| || || || ||| ||||||| || ||| Sbjct 360636 GTGCGCAACAGTCTGCTGGTGGCCCCCATGCCGACAGCGTCGACGTCGCAGATTCTGGGC 360577 Query 95143 AACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGG 95202 |||||||||| ||||| || | ||| |||||| | ||| | || ||||| || || Sbjct 360576 AACAACGAGTGCTTCGAGCCGTACACGTCCAACATCTACTCGCGCCGTGTGCTGGCGGGC 360517 Query 95203 GAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGG 95261 || |||| || ||||| | || || ||| || | | | ||||| ||||| Sbjct 360516 GAGTTCCAGGTGGTCAACCCGTGGCTGCTGAAGGATCTCGTTGAC-ATGGGTCTGTGGTC 360458 Query 95262 TGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAAT 95321 ||||| | ||||||| | | || ||| || ||||||||||||| | || Sbjct 360457 GGACAACATGAAGAACCGCATCATTGCCGAGGGCGGTTCGATCCAGAACATCCCCAACAT 360398 Query 95322 ACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 |||| ||||||||||| |||||||||||||||||||||||| | |||||| Sbjct 360397 CCCGGCCGACATCAAGGCTCTCTACAAGACCGTGTGGGAGATCTCCCAGCGC 360346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494720658359560