Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq401 253 2e-62 seq365 123 2e-23 seq222 93.3 4e-14 >seq401 Length=585928 Score = 253 bits (280), Expect = 2e-62 Identities = 749/1144 (65%), Gaps = 33/1144 (3%) Strand=Plus/Plus Query 153025 ACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGA 153084 || |||||||||| || ||||||||||||| ||| || | | | || | ||| ||| Sbjct 360495 ACGGGTTGACCACCTGGAACTCGCCCGCCAGCACACGGCGCGAGTAGATGTTGGACGTGT 360554 Query 153085 AAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACG 153144 | || || ||| | ||||| ||||| || || || | ||| | || ||||||||| | Sbjct 360555 ACGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTCGACGCTGTCGGCATGGGGG 360614 Query 153145 CCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAAT 153204 |||||| || | || |||| ||||||| | ||| | || || | ||| | Sbjct 360615 CCACCAGCAGACTGTTGCGCACGCCGTGCTCCTTAATCTTCAGACGCAGCGAGTCCCAGT 360674 Query 153205 CCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGG 153264 ||||||| | ||||| || ||| |||||||||| || | | || || ||| Sbjct 360675 CCCACAGGTCAGACGGCTTCACGTCCCACATGTCGGGTTGCAGAATGCCCTGAGACACGG 360734 Query 153265 GACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGA 153324 || ||| | |||| |||| |||| ||| | |||||| ||||| ||| | Sbjct 360735 GAGAGCCCTCGTACGTCGAGTAGGTGCCCTCGATCTTGGCCAGATCGCACGACGCCGTCA 360794 Query 153325 GCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAG--AACGGCCGCTTCTTCGCT 153382 | ||| | | ||| ||||| || |||||| || ||||| |||| || || Sbjct 360795 GAGCGGCGTGGTAAATGGTCTCAAAGATTTGCTTGTTGAGCTCACGG--GCCTCGGGCGA 360852 Query 153383 CTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGAT 153442 |||| | ||||||||||| || ||||| || ||||| ||||| | ||| | ||||| Sbjct 360853 CTCGAAGGGCATGCGCAGAGCCAAGAAGGCATCCGCCAGTCCCTGCACACCCAGACCGAT 360912 Query 153443 GGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGAT 153502 || ||||| | ||||||| | | || || | || |||| ||| || || Sbjct 360913 AGGCCGATGGCGCATGTTGCTGTTCTTGGCCTCCGGCACAGGGTAGTAGTTGACGTCAAT 360972 Query 153503 AATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATA 153562 | | ||| |||||||| || |||| | | | | | | ||| |||| ||| || || Sbjct 360973 GACGTGGTTCAGGTTGCGGACGACCAGCTGTGCAACCTCGTGAAGCTTCTTGAAGTCGTA 361032 Query 153563 GGTCATTTCGTCGACGCGTACGCATCGATTCACGGCA-----ATAGACGCCAGATTACAG 153617 ||| |||| | | ||| || ||| |||||| | ||| |||| || || Sbjct 361033 TGTC---TCGTTG--GTGTAGTCAACGAAAGACGGCAGGGCCAGAGAGGCCAAGTTGCAA 361087 Query 153618 ACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTT 153677 || ||| ||| || | | | ||||| ||||||||| | ||| |||||| || Sbjct 361088 ACAGCCACCTCATCTGGGGCAGAGTACTCCACGATCTCCGTGCACAGGTTGGAGCTGCGG 361147 Query 153678 ATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTAC 153737 ||| ||||| || | ||| ||||| ||||| ||||| ||| ||| |||||||| || Sbjct 361148 ATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAC 361207 Query 153738 GGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTA-TGCAGGTCCTGCGCTCGCAC 153796 || ||| ||||| || | ||||| || | || || | ||| || | Sbjct 361208 GGGTTGCCCGTCTCCGTCTGGGCTTCGA-GAATGGCGTACCAGAGCTTCTGGGCCTTGAT 361266 Query 153797 CCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCC 153856 | || ||| ||| || |||| ||| || ||||||||| ||||||||||||||| Sbjct 361267 CGTCTTACGACCGCGACCTTCGCGCTCATACTTCTCGTACAGGGCCTCAAACTCGTCGCC 361326 Query 153857 GTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGC 153916 |||||||| || | |||||| |||| | || |||||||| | ||| |||| | Sbjct 361327 ATAGCAGTCCGCCATGCCGGGGCACTCGTTGGGGCACATCAGTGTCCA---ATCGCCATT 361383 Query 153917 GTT---GACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGC 153973 || || || |||||||||||| || | |||||| ||| | || ||||| || Sbjct 361384 CTTCTCCACACGCTTCATGAACAGATCAGGGATCCAGAGGGCGAGGAACAGATCGCGGGC 361443 Query 153974 CTTGCAATCCTCCGCGCCCATG----TTGCGTTTCAGATTGAGCACGCTATAGATGTCGG 154029 | |||||| | ||||| ||||| ||||| ||| | | ||| |||| Sbjct 361444 ACGGATCTCCTCCTTG-CCATGGTTCTTGCG---CAGATCGAGAAACTCAAAGACATCGG 361499 Query 154030 CGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATCGA 154086 ||||||| || |||| ||| | | | ||||| ||| ||||||||||| || | Sbjct 361500 CGTGCCAAGGCTCAAGGTATATGCAGAAAGCACCGGGGCGCTTGTTTCCGCCCTGGTCCA 361559 Query 154087 CGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGT 154146 | | ||| || | |||||| |||| || | ||| || | |||| | | ||||||| Sbjct 361560 CATAGCGTGCCGTGTTGTTGTAGACACGGAGCATAGGGATGATGCCGTTGGATGTGCCGT 361619 Query 154147 TGGT 154150 | || Sbjct 361620 TTGT 361623 >seq365 Length=144107 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| || | ||||| || || || | | || ||||| |||||||||||||| Sbjct 47797 GCCGCCGCGAAGACGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCCGA 47856 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || ||| ||||| ||||| || || | | |||| |||||||| ||||| || || Sbjct 47857 CAGGGTGCGCCCATCCTCCAGTTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCTGGCGG 47916 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || ||||| ||| ||| || | |||| || | ||||| | |||||||| Sbjct 47917 GATACCCTCCTTGTCTTGGATCTTTGACTTCACATTG-TCAATCGTGTCTGACGACTCCA 47975 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| | ||| | ||| || || || || || || ||||| ||||||||| Sbjct 47976 CCTCCAACGTAATCGTCTTGCCCGTGAGCGTCTTCACAAAGATCTGCATG 48025 Score = 96.9 bits (106), Expect = 3e-15 Identities = 141/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||||||||||||| | || ||| ||||| || || || || | Sbjct 48059 GACTCCTTCTGAATGTTGTAGTCGGAAAGCGTCCGCCCATCCTCAAGCTGCTTGCCAGCG 48118 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 | || |||||||| || || || || || || |||||||| ||| | || | || | Sbjct 48119 AAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCTTTGTC-CTGAATCTTGCTCTTGAC 48177 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||| | |||||| ||||| | || | ||| || || |||||||| | Sbjct 48178 GTTG-TCGATCGTGTCCGACGACTCGACCTCAAGAGTGATCGTCTTGCCCGTCAGAGTCT 48236 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| |||||||| Sbjct 48237 TGACAAAGATCTGCAT 48252 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| |||| ||||| || | || | |||||||||| || ||||||||||| Sbjct 47569 GCCGCCACGCAGACGCAGCACCAGGTGCAGCGTTGACTCCTTCTGGATGTTGTAGTCCGA 47628 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || |||||| || || || || | | |||| || ||||| ||||| || || Sbjct 47629 AAGTGTGCGTCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCTGGCGG 47688 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| || || | |||| || | || || | ||||||| Sbjct 47689 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTG-TCAATCGTATCCGAGGACTCCA 47747 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| | ||| | ||| || || |||| || || || || ||||||||| Sbjct 47748 CCTCAAGCGTAATCGTCTTTCCTGTCAACGTCTTGACGAAGATCTGCATG 47797 >seq222 Length=676535 Score = 93.3 bits (102), Expect = 4e-14 Identities = 349/532 (66%), Gaps = 43/532 (8%) Strand=Plus/Plus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATC---GAGAGCGACACC 52382 || || ||| | || || ||||| | ||||| ||||||||||| || | || || Sbjct 131603 GTTCCTTGCATCCGGAAGAAGGCCGACTGGGCTCTGAAGTGGATCTCGGACCGTGAGTCC 131662 Query 52383 GCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCG-G 52441 || | ||| ||||| |||| || |||||| || |||| || |||| ||| | | Sbjct 131663 TCC---TTCGCCCAGCGCTTGGTCGCTTTCGCCGCCGTTGAGG--GTATTTTCTTCAGCG 131717 Query 52442 CAGCTTT-GCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCA 52500 ||||| || ||||||| | | || | | ||| | ||||| |||||||| ||| Sbjct 131718 GGGCTTTCTCCTCCATCTTCTGGTTGAAGAAGCGTGGCCTGATGCCTGGCCTGACATTCT 131777 Query 52501 GCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGC---CTCTACT 52557 |||||| | || || || ||||| || |||||||| |||||||| ||| |||| || Sbjct 131778 CGAACGAGCTTATTTCTCGTGACGAGGGCCTGCACACCGACTTTGCCTGCCTGCTCTTCT 131837 Query 52558 ------ACAAGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCA 52611 ||||| ||| || | | | || ||| | ||| | ||| || Sbjct 131838 CGCATCTCAAGAACCGCCCGAGCAAGCAGCTG--ATCG---AGGAT----ATCATTGTC- 131887 Query 52612 AGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGG 52671 || || || || || ||||||| | || | ||||| || || || || | Sbjct 131888 --GATGCTGTCAAGATTGAGCAGGAGTTCCTGACCGAGGCGCTTCCCTGCGCTCTTCTCG 131945 Query 52672 GCATGAACGCGCAGTC-CATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTG 52730 |||||||| | || | |||| | ||||| ||||| || || || || || |||| Sbjct 131946 GCATGAACTC-CACCCTCATGAAGCAATACATTGAGTTCGTTGCCGACCGCCTACTGGT- 132003 Query 52731 CAGCTC-GGGCA--GCCAAAGTACTTCAACGCTC--GCAATCCGTTTGAGTTTATGAACA 52785 |||| |||| | ||| | | | ||||| ||| || || || || ||| | | Sbjct 132004 -TGCTCTTGGCAATGACAAGG---TGTACCGCTCCACCAACCCCTTCGACTTCATGGAGA 132059 Query 52786 ACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 |||| || || | |||||||||||||| ||||||||||| ||||| || || Sbjct 132060 ACATCTCCCTGGGTGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGTGACTA 132111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496259850451920