Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq222 89.7 6e-13 >seq222 Length=676535 Score = 89.7 bits (98), Expect = 6e-13 Identities = 305/464 (66%), Gaps = 26/464 (6%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| ||||| ||||||||||||||||| ||||| ||| | ||| ||| |||||||| Sbjct 132112 GTAGTCACCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCCAT 132053 Query 127291 AAAATCAAATGGGTTCTTTGAGT--TCCAAATTGT---TGGCACCC-CAATCTGTTTGAG 127344 || || || ||||| | ||| | || |||| || || ||| | || Sbjct 132052 GAAGTCGAAGGGGTTGGTGGAGCGGTACACCTTGTCATTGCCAAGAGCAACCAGT----- 131998 Query 127345 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 127404 || || || | ||| |||||||||| | ||| |||||||| |||| || Sbjct 131997 -AGGCGGTCGGCAACGAACTCAATGTATTGCTTCATGAGGGTGGAGTTCATGCCGAGAAG 131939 Query 127405 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGAT 127464 || || ||||| || | |||| ||| |||||| | ||||| || | ||| Sbjct 131938 AGCGCAGGGAAGCGCCTCGGTCAGGAACTCCTGCTCAATCTTGACAGCATCGACAATGAT 131879 Query 127465 GGCGTGAAT-AG-TG--TCCACCCCAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCA--C 127518 | | || || || | | | ||| | ||| | | | |||||| || | Sbjct 131878 ATCCTCGATCAGCTGCTTGCTCGGGCGGT-TCTTGAG---ATGCGAGAAGAG---CAGGC 131826 Query 127519 AG-CAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGAC 127577 || |||| || ||| || ||||||||||| || || || || |||||||| ||| | Sbjct 131825 AGGCAAAGTCGGTGTGCAGGCCCTCGTCACGAGAAATAAGCTCGTTCGAGAATGTCAGGC 131766 Query 127578 CTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGA 127637 | ||||| || || ||||||||||||||||| || | | || | || |||||| | Sbjct 131765 CAGGCATCAGGCCACGCTTCTTCAACCAGAAGATGGAGGAGAAAGCCCCGCTGAAGAAAA 131706 Query 127638 TCCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAG 127681 | ||||| || ||||| || | | |||| ||| |||||| Sbjct 131705 TACCCTCAACGGCGGCGAAAGCGACCAAGCGCTGGGCGAAGGAG 131662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613504048106760