Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq401 161 2e-34 >seq401 Length=585928 Score = 161 bits (178), Expect = 2e-34 Identities = 452/681 (66%), Gaps = 12/681 (2%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATGC 203897 || ||| || |||||||| |||| | |||| ||||||| | | ||| |||||||| | Sbjct 360151 CTGGTCAACAGTGAACTGGATGGGCTGGGCGGC-GGCCTGCGTGCGCAGGTAGTACATTC 360209 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 | ||||| || ||| || ||| ||| | ||||||| | | |||| || | ||| Sbjct 360210 CCGTCTTGAGACCCAGCTTCCAGCCGGCGAAGTGCATGCTCGTGATCTTGCCCATGGTGG 360269 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCC-GATCTGCG 204016 | ||| |||||| |||||||| ||||| |||||||| ||| |||||| | || ||| Sbjct 360270 GCTCGCGCATGTGGATGTTCAGCGACTGCGACTGGTCGAT-AAATGCGCCCCGGTCGGCG 360328 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076 ||||| | | ||| || ||| || ||||||||||| |||||| | | | || || Sbjct 360329 GCCATCTGCACAATCGTGCGCTGGGAGATCTCCCACACGGTCTTGTAGAGAGCCTTGATG 360388 Query 204077 TGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCT 204135 | || | | | | || || |||||| ||| ||||| || | | || | Sbjct 360389 TCGGCCGGGATGT-TGGGGATGTTCTGGATCGAACCGCCCTCGGCAATGATGCGGTTCTT 360447 Query 204136 CGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGAT 204195 | | | ||| ||||| |||| | || ||| || ||| ||||||| | Sbjct 360448 CATGTTGTCCGACCACAGACCCATGTCAACGAGATCCTTCAGCAGCCACGGGTTGACCAC 360507 Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255 ||| || || || | |||||| | || | | | | |||| ||| | || ||||| Sbjct 360508 CTGGAACTCGCCCGCCAGCACACGGCGCGAGTAGATGTTGGACGTGTACGGCTCGAAGCA 360567 Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315 |||||||||||| | |||||| | || || || |||||||| |||| ||||| Sbjct 360568 CTCGTTGTTGCCCAGAATCTGCGACGTCGACGCTGTCGGCATGGGGGCCACCAGCAGACT 360627 Query 204316 GTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACT 204375 ||||||||| |||| | | | | | | ||| ||| |||||| || || Sbjct 360628 GTTGCGCACGCCGTGCTCCTTAATCTTCAGACGCAGCGAGTCCCAGTCCCACAGGTCAGA 360687 Query 204376 GGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTA 204435 || |||||| ||||||||||| || | ||||| ||| || || ||||| ||| Sbjct 360688 CGGCTTCACGTCCCACATGTCGGGTTGCAGAATGCCCTGAGACACGGGAGAGCCCTCGTA 360747 Query 204436 CGTCGGATAAGGCTGATCCTC-TTCT--GCCAGCTTGCACGAGGCGGCCATGGCGTGATA 204492 ||||| || | || |||| ||| ||||| | |||||| || | || ||| | Sbjct 360748 CGTCGAGTA--GGTG-CCCTCGATCTTGGCCAGATCGCACGACGCCGTCAGAGCGGCGTG 360804 Query 204493 GTACATGGTCTCAAAGATCTG 204513 ||| |||||||||||||| || Sbjct 360805 GTAAATGGTCTCAAAGATTTG 360825 Score = 116 bits (128), Expect = 6e-21 Identities = 468/722 (65%), Gaps = 20/722 (3%) Strand=Plus/Plus Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942 |||||||||||| ||||||| ||| || | |||| | || |||||| Sbjct 361114 CTCCACGATCTCCGTGCACAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCT 361173 Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGATCG 205002 ||||||||| ||| ||||||||| | ||||||||| | || ||||| |||| | | Sbjct 361174 CTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAACGGGTTGCCCGTCTCCGTCTGGGCTTC 361233 Query 205003 CAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTCACGTACATC--CCTTGAGAC 205060 |||||| | ||| | | | |||| | ||| ||| || | |||| | Sbjct 361234 GAGAATGGCGTACCAGAGCTTCTGGGCCTTGATCGTCTT-ACG-ACCGCGACCTTCGCGC 361291 Query 205061 TCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACAT 205120 || || || |||||| ||| |||| || || || |||| || || || || Sbjct 361292 TCATACTTCTCGTACAGGGCCTCAAACTCGTCGCCATAGCAGTCCGCCATGCCGGGGCAC 361351 Query 205121 TTTTTGGGACACATCAGAGACCACATCTG-ATCGTCTTTCACCCTCTCCATAAACAGGTC 205179 | ||||| |||||||| | ||| ||| || | | ||| | || ||| ||||| || Sbjct 361352 TCGTTGGGGCACATCAGTGTCCA-ATCGCCATTCTTCTCCACACGCTTCATGAACAGATC 361410 Query 205180 GCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTT 205239 |||||| ||| || |||||||| ||||| | || | || | ||| ||||||| Sbjct 361411 AGGGATCCAGAGGGCGAGGAACAGATCGCGGGCACGGATCTCCTCCTTGCCATGGTTCTT 361470 Query 205240 TTTCAAGTCCAGCCAAGCCGCAATG---TCGGCGTGCCACGGCTCTAACCACACGGCCAT 205296 || || || | | ||| | ||||||||||| ||||| | | | | | Sbjct 361471 GCGCAGATCGAGAAA---CTCAAAGACATCGGCGTGCCAAGGCTCAAGGTATATGCAGAA 361527 Query 205297 TGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCG 205356 || || || | |||||| || ||||||||||| ||| | | | |||| | || || Sbjct 361528 AGCACCGGGGCGCTTGTTTCCGCCCTGGTCCACATAGCGTGCCGTGTTGTTGTAGACACG 361587 Query 205357 CAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGC 205416 ||||| || | | ||||||| || ||||| |||| | ||| ||||| ||| Sbjct 361588 GAGCATAGGGATGATGCCGTTGGATGTGCCGTTTGTGCCGGCAATGTAGGAGCCAGTAGC 361647 Query 205417 CCTCA--CGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCA- 205473 || | || |||| || | |||||| || || | ||||| |||| ||| || Sbjct 361648 CCGGATGCGGTGGACATTG--AGGCCAATTCCACCGGCCGTCTTGGAGATCATGGCACAG 361705 Query 205474 CTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGT-CACCAGATAGC 205532 ||||| || ||| |||||| || ||||| || ||| || ||| ||| || ||| Sbjct 361706 GTCTTG-AGGGTGTCGTAGATACCCTCGATGCTGTCATCCTTCA-TGTCCACGAGGAAGC 361763 Query 205533 ACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGA 205592 | || | || || ||| |||||| |||| |||||||||||| ||| || ||| Sbjct 361764 AGGAGGACATCTGGGCCTGTGGGGTGCCGGCGTTGAAGAGCGTGGGCGAGGCATGCGTGA 361823 Query 205593 AG 205594 || Sbjct 361824 AG 361825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795151114890160