Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq401 161 2e-34
>seq401
Length=585928
Score = 161 bits (178), Expect = 2e-34
Identities = 452/681 (66%), Gaps = 12/681 (2%)
Strand=Plus/Plus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATGC 203897
|| ||| || |||||||| |||| | |||| ||||||| | | ||| |||||||| |
Sbjct 360151 CTGGTCAACAGTGAACTGGATGGGCTGGGCGGC-GGCCTGCGTGCGCAGGTAGTACATTC 360209
Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957
| ||||| || ||| || ||| ||| | ||||||| | | |||| || | |||
Sbjct 360210 CCGTCTTGAGACCCAGCTTCCAGCCGGCGAAGTGCATGCTCGTGATCTTGCCCATGGTGG 360269
Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCC-GATCTGCG 204016
| ||| |||||| |||||||| ||||| |||||||| ||| |||||| | || |||
Sbjct 360270 GCTCGCGCATGTGGATGTTCAGCGACTGCGACTGGTCGAT-AAATGCGCCCCGGTCGGCG 360328
Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076
||||| | | ||| || ||| || ||||||||||| |||||| | | | || ||
Sbjct 360329 GCCATCTGCACAATCGTGCGCTGGGAGATCTCCCACACGGTCTTGTAGAGAGCCTTGATG 360388
Query 204077 TGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCT 204135
| || | | | | || || |||||| ||| ||||| || | | || |
Sbjct 360389 TCGGCCGGGATGT-TGGGGATGTTCTGGATCGAACCGCCCTCGGCAATGATGCGGTTCTT 360447
Query 204136 CGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGAT 204195
| | | ||| ||||| |||| | || ||| || ||| ||||||| |
Sbjct 360448 CATGTTGTCCGACCACAGACCCATGTCAACGAGATCCTTCAGCAGCCACGGGTTGACCAC 360507
Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255
||| || || || | |||||| | || | | | | |||| ||| | || |||||
Sbjct 360508 CTGGAACTCGCCCGCCAGCACACGGCGCGAGTAGATGTTGGACGTGTACGGCTCGAAGCA 360567
Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315
|||||||||||| | |||||| | || || || |||||||| |||| |||||
Sbjct 360568 CTCGTTGTTGCCCAGAATCTGCGACGTCGACGCTGTCGGCATGGGGGCCACCAGCAGACT 360627
Query 204316 GTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACT 204375
||||||||| |||| | | | | | | ||| ||| |||||| || ||
Sbjct 360628 GTTGCGCACGCCGTGCTCCTTAATCTTCAGACGCAGCGAGTCCCAGTCCCACAGGTCAGA 360687
Query 204376 GGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTA 204435
|| |||||| ||||||||||| || | ||||| ||| || || ||||| |||
Sbjct 360688 CGGCTTCACGTCCCACATGTCGGGTTGCAGAATGCCCTGAGACACGGGAGAGCCCTCGTA 360747
Query 204436 CGTCGGATAAGGCTGATCCTC-TTCT--GCCAGCTTGCACGAGGCGGCCATGGCGTGATA 204492
||||| || | || |||| ||| ||||| | |||||| || | || ||| |
Sbjct 360748 CGTCGAGTA--GGTG-CCCTCGATCTTGGCCAGATCGCACGACGCCGTCAGAGCGGCGTG 360804
Query 204493 GTACATGGTCTCAAAGATCTG 204513
||| |||||||||||||| ||
Sbjct 360805 GTAAATGGTCTCAAAGATTTG 360825
Score = 116 bits (128), Expect = 6e-21
Identities = 468/722 (65%), Gaps = 20/722 (3%)
Strand=Plus/Plus
Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942
|||||||||||| ||||||| ||| || | |||| | || ||||||
Sbjct 361114 CTCCACGATCTCCGTGCACAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCT 361173
Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGATCG 205002
||||||||| ||| ||||||||| | ||||||||| | || ||||| |||| | |
Sbjct 361174 CTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAACGGGTTGCCCGTCTCCGTCTGGGCTTC 361233
Query 205003 CAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTCACGTACATC--CCTTGAGAC 205060
|||||| | ||| | | | |||| | ||| ||| || | |||| |
Sbjct 361234 GAGAATGGCGTACCAGAGCTTCTGGGCCTTGATCGTCTT-ACG-ACCGCGACCTTCGCGC 361291
Query 205061 TCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACAT 205120
|| || || |||||| ||| |||| || || || |||| || || || ||
Sbjct 361292 TCATACTTCTCGTACAGGGCCTCAAACTCGTCGCCATAGCAGTCCGCCATGCCGGGGCAC 361351
Query 205121 TTTTTGGGACACATCAGAGACCACATCTG-ATCGTCTTTCACCCTCTCCATAAACAGGTC 205179
| ||||| |||||||| | ||| ||| || | | ||| | || ||| ||||| ||
Sbjct 361352 TCGTTGGGGCACATCAGTGTCCA-ATCGCCATTCTTCTCCACACGCTTCATGAACAGATC 361410
Query 205180 GCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTT 205239
|||||| ||| || |||||||| ||||| | || | || | ||| |||||||
Sbjct 361411 AGGGATCCAGAGGGCGAGGAACAGATCGCGGGCACGGATCTCCTCCTTGCCATGGTTCTT 361470
Query 205240 TTTCAAGTCCAGCCAAGCCGCAATG---TCGGCGTGCCACGGCTCTAACCACACGGCCAT 205296
|| || || | | ||| | ||||||||||| ||||| | | | | |
Sbjct 361471 GCGCAGATCGAGAAA---CTCAAAGACATCGGCGTGCCAAGGCTCAAGGTATATGCAGAA 361527
Query 205297 TGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCG 205356
|| || || | |||||| || ||||||||||| ||| | | | |||| | || ||
Sbjct 361528 AGCACCGGGGCGCTTGTTTCCGCCCTGGTCCACATAGCGTGCCGTGTTGTTGTAGACACG 361587
Query 205357 CAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGC 205416
||||| || | | ||||||| || ||||| |||| | ||| ||||| |||
Sbjct 361588 GAGCATAGGGATGATGCCGTTGGATGTGCCGTTTGTGCCGGCAATGTAGGAGCCAGTAGC 361647
Query 205417 CCTCA--CGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCA- 205473
|| | || |||| || | |||||| || || | ||||| |||| ||| ||
Sbjct 361648 CCGGATGCGGTGGACATTG--AGGCCAATTCCACCGGCCGTCTTGGAGATCATGGCACAG 361705
Query 205474 CTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGT-CACCAGATAGC 205532
||||| || ||| |||||| || ||||| || ||| || ||| ||| || |||
Sbjct 361706 GTCTTG-AGGGTGTCGTAGATACCCTCGATGCTGTCATCCTTCA-TGTCCACGAGGAAGC 361763
Query 205533 ACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGA 205592
| || | || || ||| |||||| |||| |||||||||||| ||| || |||
Sbjct 361764 AGGAGGACATCTGGGCCTGTGGGGTGCCGGCGTTGAAGAGCGTGGGCGAGGCATGCGTGA 361823
Query 205593 AG 205594
||
Sbjct 361824 AG 361825
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795151114890160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |