Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq365 152 6e-32
seq124 140 4e-28
seq64 136 4e-27
>seq365
Length=144107
Score = 152 bits (168), Expect = 6e-32
Identities = 151/193 (78%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||| |||||||| || || |||| |||||||||||||| |||||
Sbjct 48289 CTCCTTCTGGATGTTGTAATCGGATAGCGTCCGACCGTCCTCGAGCTGCTTGCCAGCGAA 48348
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||||||||| |||| || | || ||| |||||| ||||| |||||| |||
Sbjct 48349 AATGAGGCGCTGCTGATCGGGGGGAATGCCCTCTTTGTCCTGAATCTTGCTCTTGA-CGT 48407
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | |||||| |||||| || || | |||||||| ||||| || |||||||| |
Sbjct 48408 TGTCTATCGTGTCCGACGATTCAACCTCTAGTGTGATGGTCTTGCCGGTAAGCGTTTTGA 48467
Query 46581 CAAAGATTTGCAT 46593
||||||| |||||
Sbjct 48468 CAAAGATCTGCAT 48480
Score = 147 bits (162), Expect = 2e-30
Identities = 172/230 (75%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
|||| || | | ||| | ||||||||||| ||| |||||| || || ||||||||||
Sbjct 48024 TGCCACCACGGAGACGGAGCACCAGATGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGG 48083
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
| || || ||| | || || ||||||||||| ||||| || | |||||||| |||| |
Sbjct 48084 AAAGCGTCCGCCCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGG 48143
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 46543
| | || ||| |||||| ||||| |||||| ||| | | | |||||| ||| ||
Sbjct 48144 GAATGCCCTCTTTGTCCTGAATCTTGCTCTTGA-CGTTGTCGATCGTGTCCGACGACTCG 48202
Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || | ||||| || ||||||||||| || || |||||||| |||||
Sbjct 48203 ACCTCAAGAGTGATCGTCTTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 48252
Score = 138 bits (152), Expect = 1e-27
Identities = 171/234 (73%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419
||| | ||| || | | ||||| |||||| |||| || |||||| ||||| |||||
Sbjct 47563 TTACTGGCCGCCACGCAGACGCAGCACCAGGTGCAGCGTTGACTCCTTCTGGATGTTGTA 47622
Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479
||| || || ||||| |||| || ||||||||||| || || |||| |||||||||||
Sbjct 47623 GTCCGAAAGTGTGCGTCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTC 47682
Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGA 46539
| ||| | || |||||||||| ||||||| ||||| | | | ||| || ||
Sbjct 47683 TGGCGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATCGTATCCGAGGA 47742
Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||||| || | ||| || || || || |||| ||| || || ||||| |||||
Sbjct 47743 CTCCACCTCAAGCGTAATCGTCTTTCCTGTCAACGTCTTGACGAAGATCTGCAT 47796
Score = 129 bits (142), Expect = 7e-25
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
|||| || | | ||||| ||||| |||| || ||||| || || |||||||| |
Sbjct 47796 TGCCGCCGCGAAGACGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCCG 47855
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
| || |||||| | || || || |||||||| || || |||| ||||||||||| | ||
Sbjct 47856 ACAGGGTGCGCCCATCCTCCAGTTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCTGGCG 47915
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544
| | | ||||||||| |||||| ||| | | | | |||||| ||| ||||
Sbjct 47916 GGATACCCTCCTTGTCTTGGATCTTTGACTTCACATTGTCAATCGTGTCTGACGACTCCA 47975
Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| |||| ||| || || |||||||| ||||| || |||||||| |||||
Sbjct 47976 CCTCCAACGTAATCGTCTTGCCCGTGAGCGTCTTCACAAAGATCTGCAT 48024
>seq124
Length=325275
Score = 140 bits (154), Expect = 4e-28
Identities = 152/202 (75%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
|||||| |||| || |||||| ||||| |||||||| || || || || |||| ||
Sbjct 289415 CACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGACAGGGTCCGGCCGTCCTC 289474
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
|||||||||||| || || |||| |||||||||||||| ||| | || ||||||||||
Sbjct 289475 GAGCTGCTTGCCAGCAAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTG 289534
Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
|||||| ||||| | | | |||||| || || || |||| |||||||| ||
Sbjct 289535 GATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTT 289594
Query 46564 GCCCGTCAGCGTTTTAACAAAG 46585
|||||| || || || || |||
Sbjct 289595 GCCCGTAAGGGTCTTCACGAAG 289616
>seq64
Length=19946
Score = 136 bits (150), Expect = 4e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
|||||| || | || |||||||||||||| |||||||| || ||||| || | || ||
Sbjct 14270 CACCAGGTGGAGCGTGCTCTCCTTTTGGATGTTGTAGTCAGAGAGAGTCCGACCATCCTC 14329
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
|||||||| || ||||| |||| |||||||||||| | || | || ||| ||||||
Sbjct 14330 CAGCTGCTTTCCCGCGAAAATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTG 14389
Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
||||| ||||| | | | |||||||| || || || | |||||||| ||
Sbjct 14390 AATCTTGGACTTGACATTGTCGATTGTGTCGCTGCTCTCGACCTCAAGGGTGATGGTCTT 14449
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||||||||| || || || ||||| |||||
Sbjct 14450 GCCCGTCAGGGTCTTCACGAAGATCTGCAT 14479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565235496087720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |