Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq365 152 6e-32 seq124 140 4e-28 seq64 136 4e-27 >seq365 Length=144107 Score = 152 bits (168), Expect = 6e-32 Identities = 151/193 (78%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| |||||||| || || |||| |||||||||||||| ||||| Sbjct 48289 CTCCTTCTGGATGTTGTAATCGGATAGCGTCCGACCGTCCTCGAGCTGCTTGCCAGCGAA 48348 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||| |||| || | || ||| |||||| ||||| |||||| ||| Sbjct 48349 AATGAGGCGCTGCTGATCGGGGGGAATGCCCTCTTTGTCCTGAATCTTGCTCTTGA-CGT 48407 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| |||||| || || | |||||||| ||||| || |||||||| | Sbjct 48408 TGTCTATCGTGTCCGACGATTCAACCTCTAGTGTGATGGTCTTGCCGGTAAGCGTTTTGA 48467 Query 46581 CAAAGATTTGCAT 46593 ||||||| ||||| Sbjct 48468 CAAAGATCTGCAT 48480 Score = 147 bits (162), Expect = 2e-30 Identities = 172/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || | | ||| | ||||||||||| ||| |||||| || || |||||||||| Sbjct 48024 TGCCACCACGGAGACGGAGCACCAGATGCAGCGTAGACTCCTTCTGAATGTTGTAGTCGG 48083 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || || ||| | || || ||||||||||| ||||| || | |||||||| |||| | Sbjct 48084 AAAGCGTCCGCCCATCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGG 48143 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 46543 | | || ||| |||||| ||||| |||||| ||| | | | |||||| ||| || Sbjct 48144 GAATGCCCTCTTTGTCCTGAATCTTGCTCTTGA-CGTTGTCGATCGTGTCCGACGACTCG 48202 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | ||||| || ||||||||||| || || |||||||| ||||| Sbjct 48203 ACCTCAAGAGTGATCGTCTTGCCCGTCAGAGTCTTGACAAAGATCTGCAT 48252 Score = 138 bits (152), Expect = 1e-27 Identities = 171/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419 ||| | ||| || | | ||||| |||||| |||| || |||||| ||||| ||||| Sbjct 47563 TTACTGGCCGCCACGCAGACGCAGCACCAGGTGCAGCGTTGACTCCTTCTGGATGTTGTA 47622 Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 ||| || || ||||| |||| || ||||||||||| || || |||| ||||||||||| Sbjct 47623 GTCCGAAAGTGTGCGTCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTC 47682 Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGA 46539 | ||| | || |||||||||| ||||||| ||||| | | | ||| || || Sbjct 47683 TGGCGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATCGTATCCGAGGA 47742 Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || | ||| || || || || |||| ||| || || ||||| ||||| Sbjct 47743 CTCCACCTCAAGCGTAATCGTCTTTCCTGTCAACGTCTTGACGAAGATCTGCAT 47796 Score = 129 bits (142), Expect = 7e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || | | ||||| ||||| |||| || ||||| || || |||||||| | Sbjct 47796 TGCCGCCGCGAAGACGCAGCACCAAGTGCAGCGTCGATTCCTTCTGAATGTTGTAGTCCG 47855 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || |||||| | || || || |||||||| || || |||| ||||||||||| | || Sbjct 47856 ACAGGGTGCGCCCATCCTCCAGTTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCTGGCG 47915 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | ||||||||| |||||| ||| | | | | |||||| ||| |||| Sbjct 47916 GGATACCCTCCTTGTCTTGGATCTTTGACTTCACATTGTCAATCGTGTCTGACGACTCCA 47975 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| ||| || || |||||||| ||||| || |||||||| ||||| Sbjct 47976 CCTCCAACGTAATCGTCTTGCCCGTGAGCGTCTTCACAAAGATCTGCAT 48024 >seq124 Length=325275 Score = 140 bits (154), Expect = 4e-28 Identities = 152/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| |||| || |||||| ||||| |||||||| || || || || |||| || Sbjct 289415 CACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGACAGGGTCCGGCCGTCCTC 289474 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||| || || |||| |||||||||||||| ||| | || |||||||||| Sbjct 289475 GAGCTGCTTGCCAGCAAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTG 289534 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||||| | | | |||||| || || || |||| |||||||| || Sbjct 289535 GATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTT 289594 Query 46564 GCCCGTCAGCGTTTTAACAAAG 46585 |||||| || || || || ||| Sbjct 289595 GCCCGTAAGGGTCTTCACGAAG 289616 >seq64 Length=19946 Score = 136 bits (150), Expect = 4e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||||||||||| |||||||| || ||||| || | || || Sbjct 14270 CACCAGGTGGAGCGTGCTCTCCTTTTGGATGTTGTAGTCAGAGAGAGTCCGACCATCCTC 14329 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||| || ||||| |||| |||||||||||| | || | || ||| |||||| Sbjct 14330 CAGCTGCTTTCCCGCGAAAATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTG 14389 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||| ||||| | | | |||||||| || || || | |||||||| || Sbjct 14390 AATCTTGGACTTGACATTGTCGATTGTGTCGCTGCTCTCGACCTCAAGGGTGATGGTCTT 14449 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||||||| || || || ||||| ||||| Sbjct 14450 GCCCGTCAGGGTCTTCACGAAGATCTGCAT 14479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565235496087720