Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12- 02] 411 sequences; 26,537,341 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq222 161 1e-34 seq365 134 1e-26 seq64 131 2e-25 seq124 120 3e-22 >seq222 Length=676535 Score = 161 bits (178), Expect = 1e-34 Identities = 204/277 (74%), Gaps = 5/277 (2%) Strand=Plus/Minus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 |||||||||||| || || || | |||||||| ||||||||||| ||| || || Sbjct 131499 GTAGGTGTCGATAAGCAGGGAGTAAGTCTCCGAGTGGACGTTCTCCATCATGATCTGGAA 131440 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGAT 133285 |||||| ||||| || ||||| |||||| || || | || ||| ||||| || || | Sbjct 131439 GCCGTAGAAGCAGCGAGCCTCTGGCACCTGAACCTC-GGCGCTGAAGCGCTCAACAAGGT 131381 Query 133286 TTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGC 133345 | |||||||| |||||||| |||||| || || ||||| | |||| || ||| | Sbjct 131380 TCTCGTTGACAATGCCGTCAGAGGCGGCAAAGAATGCCAGAATGTGCGAGACGAAGAACC 131321 Query 133346 GCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCT 133402 |||| | ||||||| ||| | ||||||| || |||||||| ||||| | |||| Sbjct 131320 GCTCATCATCGTTCAGGCGGTTGTTCCAGTCGTGCAGATCCTTGGAGAGGTCAATTTCCT 131261 Query 133403 CGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 || | ||||| ||||| |||||| || |||||||| Sbjct 131260 CGGCAGTCCAGAACGAAGCCTCGTGCTTCTTGTACAT 131224 >seq365 Length=144107 Score = 134 bits (148), Expect = 1e-26 Identities = 171/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || |||||||||||||| || || || | || || ||| | | Sbjct 48024 ATGCAGATCTTTGTGAAGACGCTCACGGGCAAGACGATTACGTTGGAGGTGGAGTCGTCA 47965 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 |||| | || || | | || ||| |||| ||||| ||||| || |||||| |||| Sbjct 47964 GACACGATTGACAATG-TGAAGTCAAAGATCCAAGACAAGGAGGGTAT-CCCGCCAGACC 47907 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | || ||||| || ||||| || | ||||||||| ||||||| Sbjct 47906 AGCAGCGTCTGATCTTTGCAGGCAAGCAACTGGAGGATGGGCGCACCCTGTCGGACTACA 47847 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||| || |||||| |||||||||| |||||||||||| | | |||||| Sbjct 47846 ACATTCAGAAGGAATCGACGCTGCACTTGGTGCTGCGTCTTCGCGGCGGC 47797 Score = 132 bits (146), Expect = 5e-26 Identities = 161/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || |||||||| || ||||| | || |||||| | | Sbjct 48252 ATGCAGATCTTTGTCAAGACTCTGACGGGCAAGACGATCACTCTTGAGGTCGAGTCGTCG 48193 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || | | | | |||| || || | ||||||||||| |||||| |||| || Sbjct 48192 GACA-CGATCGACAACGTCAAGAGCAAGATTCAGGACAAAGAGGGCATTCCCCCCGATCA 48134 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||||| ||| ||||| ||||| || || | ||| || || ||||||||| Sbjct 48133 GCAGCGTCTCATTTTCGCTGGCAAGCAGCTTGAGGATGGGCGGACGCTTTCCGACTACAA 48074 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| || ||||| | ||||||||| ||||||| ||| Sbjct 48073 CATTCAGAAGGAGTCTACGCTGCATCTGGTGCTCCGT 48037 Score = 123 bits (136), Expect = 2e-23 Identities = 167/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || |||||||| || ||||| |||||||| | || || || | | Sbjct 48480 ATGCAGATCTTTGTCAAAACGCTTACCGGCAAGACCATCACACTAGAGGTTGAATCGTCG 48421 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | |||| | |||| || || | ||||||||||| |||||| |||| | Sbjct 48420 GACACGATAGACAACG--TCAAGAGCAAGATTCAGGACAAAGAGGGCATTCCCCCCGATC 48363 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||||| ||| ||||| ||||| || |||| || || || ||| |||| Sbjct 48362 AGCAGCGCCTCATTTTCGCTGGCAAGCAGCTCGAGGACGGTCGGACGCTATCCGATTACA 48303 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| ||||| ||||||| || | || |||||| || | || || Sbjct 48302 ACATCCAGAAGGAGTCGACGCTCCACCTCGTCCTGCGTCTGCGTGGTGG 48254 Score = 118 bits (130), Expect = 1e-21 Identities = 168/231 (73%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||| | || || || || || || | || || ||| || | Sbjct 47796 ATGCAGATCTTCGTCAAGACGTTGACAGGAAAGACGATTACGCTTGAGGTGGAGTCCTCG 47737 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 || | | || || | | || || |||| ||||| ||||| || |||||| |||| Sbjct 47736 GATACGATTGACAATG-TCAAGTCGAAGATCCAGGACAAGGAGGGCAT-CCCGCCAGACC 47679 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | |||||||| || | || ||||| |||||||| |||| ||||| || ||||||| Sbjct 47678 AGCAGCGGCTGATCTTTGCTGGCAAGCAGCTGGAGGACGGACGCACACTTTCGGACTACA 47619 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||||||| ||||| | |||||||| ||||||||||| || | ||||||| Sbjct 47618 ACATCCAGAAGGAGTCAACGCTGCACCTGGTGCTGCGTCTGCGTGGCGGCC 47568 >seq64 Length=19946 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || |||||||| ||||||||| | || |||||| || | Sbjct 14479 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGAGCAGC 14420 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || || || | ||||||||||| || ||| | ||||| Sbjct 14419 GACACAATCGACAATGTCAAGTCCAAGATTCAGGACAAAGAGGGCATCCCCCCTGACCAG 14360 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || |||| |||||| || |||||||| || | || || ||| ||||||||| Sbjct 14359 CAGCGCCTGATTTTCGCGGGAAAGCAGCTGGAGGATGGTCGGACTCTCTCTGACTACAAC 14300 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||||||| ||| ||||| || ||||||| || | | |||||| Sbjct 14299 ATCCAAAAGGAGAGC-ACGCTCCACCTGGTGCTTCGGCTCCGTGGCGGC 14252 >seq124 Length=325275 Score = 120 bits (132), Expect = 3e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || |||||||| ||||||||| | || |||||| || | |||| | Sbjct 289615 TTCGTGAAGACCCTTACGGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 289556 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||| || || ||||||| ||||| || Sbjct 289555 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAGCAGCGCCTG 289496 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 |||| || ||||| ||||| || |||| || ||||| |||||||||||||| ||| Sbjct 289495 ATTTTTGCTGGCAAGCAGCTCGAGGACGGCCGGACCCTGTCGGACTACAACATCCAGAAG 289436 Query 38433 GAAGCGACGCTGCATTTGGTGCTGCG 38458 || |||| ||||| ||||||| || Sbjct 289435 GAGTCGACCCTGCACCTGGTGCTCCG 289410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500170230362240