Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq222 161 1e-34
seq365 134 1e-26
seq64 131 2e-25
seq124 120 3e-22
>seq222
Length=676535
Score = 161 bits (178), Expect = 1e-34
Identities = 204/277 (74%), Gaps = 5/277 (2%)
Strand=Plus/Minus
Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
|||||||||||| || || || | |||||||| ||||||||||| ||| || ||
Sbjct 131499 GTAGGTGTCGATAAGCAGGGAGTAAGTCTCCGAGTGGACGTTCTCCATCATGATCTGGAA 131440
Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGAT 133285
|||||| ||||| || ||||| |||||| || || | || ||| ||||| || || |
Sbjct 131439 GCCGTAGAAGCAGCGAGCCTCTGGCACCTGAACCTC-GGCGCTGAAGCGCTCAACAAGGT 131381
Query 133286 TTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGC 133345
| |||||||| |||||||| |||||| || || ||||| | |||| || ||| |
Sbjct 131380 TCTCGTTGACAATGCCGTCAGAGGCGGCAAAGAATGCCAGAATGTGCGAGACGAAGAACC 131321
Query 133346 GCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCT 133402
|||| | ||||||| ||| | ||||||| || |||||||| ||||| | ||||
Sbjct 131320 GCTCATCATCGTTCAGGCGGTTGTTCCAGTCGTGCAGATCCTTGGAGAGGTCAATTTCCT 131261
Query 133403 CGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
|| | ||||| ||||| |||||| || ||||||||
Sbjct 131260 CGGCAGTCCAGAACGAAGCCTCGTGCTTCTTGTACAT 131224
>seq365
Length=144107
Score = 134 bits (148), Expect = 1e-26
Identities = 171/230 (74%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || |||||||||||||| || || || | || || ||| | |
Sbjct 48024 ATGCAGATCTTTGTGAAGACGCTCACGGGCAAGACGATTACGTTGGAGGTGGAGTCGTCA 47965
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361
|||| | || || | | || ||| |||| ||||| ||||| || |||||| ||||
Sbjct 47964 GACACGATTGACAATG-TGAAGTCAAAGATCCAAGACAAGGAGGGTAT-CCCGCCAGACC 47907
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| || || | || ||||| || ||||| || | ||||||||| |||||||
Sbjct 47906 AGCAGCGTCTGATCTTTGCAGGCAAGCAACTGGAGGATGGGCGCACCCTGTCGGACTACA 47847
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||| || |||||| |||||||||| |||||||||||| | | ||||||
Sbjct 47846 ACATTCAGAAGGAATCGACGCTGCACTTGGTGCTGCGTCTTCGCGGCGGC 47797
Score = 132 bits (146), Expect = 5e-26
Identities = 161/217 (74%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || |||||||| || ||||| | || |||||| | |
Sbjct 48252 ATGCAGATCTTTGTCAAGACTCTGACGGGCAAGACGATCACTCTTGAGGTCGAGTCGTCG 48193
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| || | | | | |||| || || | ||||||||||| |||||| |||| ||
Sbjct 48192 GACA-CGATCGACAACGTCAAGAGCAAGATTCAGGACAAAGAGGGCATTCCCCCCGATCA 48134
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||||| ||| ||||| ||||| || || | ||| || || |||||||||
Sbjct 48133 GCAGCGTCTCATTTTCGCTGGCAAGCAGCTTGAGGATGGGCGGACGCTTTCCGACTACAA 48074
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||| || ||||| | ||||||||| ||||||| |||
Sbjct 48073 CATTCAGAAGGAGTCTACGCTGCATCTGGTGCTCCGT 48037
Score = 123 bits (136), Expect = 2e-23
Identities = 167/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || |||||||| || ||||| |||||||| | || || || | |
Sbjct 48480 ATGCAGATCTTTGTCAAAACGCTTACCGGCAAGACCATCACACTAGAGGTTGAATCGTCG 48421
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | |||| | |||| || || | ||||||||||| |||||| |||| |
Sbjct 48420 GACACGATAGACAACG--TCAAGAGCAAGATTCAGGACAAAGAGGGCATTCCCCCCGATC 48363
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| ||||||| ||| ||||| ||||| || |||| || || || ||| ||||
Sbjct 48362 AGCAGCGCCTCATTTTCGCTGGCAAGCAGCTCGAGGACGGTCGGACGCTATCCGATTACA 48303
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||| ||||| ||||||| || | || |||||| || | || ||
Sbjct 48302 ACATCCAGAAGGAGTCGACGCTCCACCTCGTCCTGCGTCTGCGTGGTGG 48254
Score = 118 bits (130), Expect = 1e-21
Identities = 168/231 (73%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || ||| | || || || || || || | || || ||| || |
Sbjct 47796 ATGCAGATCTTCGTCAAGACGTTGACAGGAAAGACGATTACGCTTGAGGTGGAGTCCTCG 47737
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361
|| | | || || | | || || |||| ||||| ||||| || |||||| ||||
Sbjct 47736 GATACGATTGACAATG-TCAAGTCGAAGATCCAGGACAAGGAGGGCAT-CCCGCCAGACC 47679
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| |||||||| || | || ||||| |||||||| |||| ||||| || |||||||
Sbjct 47678 AGCAGCGGCTGATCTTTGCTGGCAAGCAGCTGGAGGACGGACGCACACTTTCGGACTACA 47619
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
||||||| ||||| | |||||||| ||||||||||| || | |||||||
Sbjct 47618 ACATCCAGAAGGAGTCAACGCTGCACCTGGTGCTGCGTCTGCGTGGCGGCC 47568
>seq64
Length=19946
Score = 131 bits (144), Expect = 2e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || |||||||| ||||||||| | || |||||| || |
Sbjct 14479 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGAGCAGC 14420
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | || || || | ||||||||||| || ||| | |||||
Sbjct 14419 GACACAATCGACAATGTCAAGTCCAAGATTCAGGACAAAGAGGGCATCCCCCCTGACCAG 14360
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || |||| |||||| || |||||||| || | || || ||| |||||||||
Sbjct 14359 CAGCGCCTGATTTTCGCGGGAAAGCAGCTGGAGGATGGTCGGACTCTCTCTGACTACAAC 14300
Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||||||||| ||| ||||| || ||||||| || | | ||||||
Sbjct 14299 ATCCAAAAGGAGAGC-ACGCTCCACCTGGTGCTTCGGCTCCGTGGCGGC 14252
>seq124
Length=325275
Score = 120 bits (132), Expect = 3e-22
Identities = 150/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || |||||||| ||||||||| | || |||||| || | |||| |
Sbjct 289615 TTCGTGAAGACCCTTACGGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 289556
Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| | | || || |||| ||||| ||||| || || ||||||| ||||| ||
Sbjct 289555 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAGCAGCGCCTG 289496
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|||| || ||||| ||||| || |||| || ||||| |||||||||||||| |||
Sbjct 289495 ATTTTTGCTGGCAAGCAGCTCGAGGACGGCCGGACCCTGTCGGACTACAACATCCAGAAG 289436
Query 38433 GAAGCGACGCTGCATTTGGTGCTGCG 38458
|| |||| ||||| ||||||| ||
Sbjct 289435 GAGTCGACCCTGCACCTGGTGCTCCG 289410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500170230362240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |