Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq222 98.7 1e-15
seq68 84.2 3e-11
>seq222
Length=676535
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/226 (70%), Gaps = 6/226 (3%)
Strand=Plus/Plus
Query 102109 CAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGT 102165
||||||| || || | ||||| || || |||||| |||||||| | || |||
Sbjct 131601 CAGTTCCTTGCATCCGGAAGAAGGCCGACTGGGCTCTGAAGTGGATCTCGGACCGTGAGT 131660
Query 102166 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225
| ||||| || |||| | |||| || || ||||||||||| |||||| |
Sbjct 131661 CC---TCCTTCGCCCAGCGCTTGGTCGCTTTCGCCGCCGTTGAGGGTATTTTCTTCAGCG 131717
Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285
| | |||| | | || | ||| | |||||||| || || ||||| || || ||||
Sbjct 131718 GGGCTTTCTCCTCCATCTTCTGGTTGAAGAAGCGTGGCCTGATGCCTGGCCTGACATTCT 131777
Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
| ||||||||||| |||||||||||||| || ||| || |||||
Sbjct 131778 CGAACGAGCTTATTTCTCGTGACGAGGGCCTGCACACCGACTTTGC 131823
>seq68
Length=355481
Score = 84.2 bits (92), Expect = 3e-11
Identities = 156/227 (69%), Gaps = 4/227 (2%)
Strand=Plus/Minus
Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 16123
||| || ||||| |||||||| |||||||| || || | ||| || |||| ||
Sbjct 83000 GGCGTCGATCTCGTCAATGAACACGATGCAGGGCGCGTTCTTGCGGGCCGTCGCAAACAG 82941
Query 16124 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG--CGGCGGAA 16181
|| || || ||| |||||||| || ||||||||||| ||||| | | | || ||
Sbjct 82940 GTCGCGCACCCGCGACGCGCCCACGCCCACAAACATCTCGACAAACTCGGACCCGCTGAC 82881
Query 16182 CATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCC 16241
| || ||||| || || || || || |||| ||| || || ||||| |||
Sbjct 82880 GCT--GAAAAAGGGCACGCCCGACTCGCCAGCCGTGGCCTTGGCCAGCAGCGTCTTGCCC 82823
Query 16242 GTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288
|| || || || || |||| ||| || || ||||||||||||||
Sbjct 82822 GTGCCCGGAGGCCCGGCCAGGATGGCGCCGCGCGGAATCTTGGCGCC 82776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620739210935920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |